Detailed information
Bioinformatically predicted
Overview
| Name | irvR | Type | Regulator |
| Locus tag | FD482_RS05860 | Genome accession | NZ_CP040229 |
| Coordinates | 1241451..1242164 (-) | Length | 237 a.a. |
| NCBI ID | WP_001031454.1 | Uniprot ID | A0A0H2XG68 |
| Organism | Staphylococcus aureus strain GD487 | ||
| Function | regulate expression of competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1236451..1247164
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FD482_RS05830 (FD482_06025) | - | 1237267..1237815 (+) | 549 | WP_258319401.1 | alpha/beta hydrolase | - |
| FD482_RS05835 (FD482_06030) | - | 1237749..1238786 (-) | 1038 | WP_000857185.1 | site-specific integrase | - |
| FD482_RS05840 (FD482_06035) | - | 1238978..1239691 (-) | 714 | WP_001549185.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| FD482_RS05845 (FD482_06040) | - | 1239770..1239952 (-) | 183 | WP_000694772.1 | hypothetical protein | - |
| FD482_RS05850 (FD482_06045) | - | 1240156..1240497 (-) | 342 | WP_031896415.1 | hypothetical protein | - |
| FD482_RS05855 (FD482_06050) | - | 1240503..1241435 (-) | 933 | WP_138766966.1 | exonuclease domain-containing protein | - |
| FD482_RS05860 (FD482_06055) | irvR | 1241451..1242164 (-) | 714 | WP_001031454.1 | XRE family transcriptional regulator | Regulator |
| FD482_RS05865 (FD482_06060) | - | 1242127..1242300 (+) | 174 | WP_031929273.1 | hypothetical protein | - |
| FD482_RS05870 (FD482_06065) | - | 1242297..1242560 (+) | 264 | WP_000854072.1 | helix-turn-helix transcriptional regulator | - |
| FD482_RS05875 (FD482_06070) | - | 1242576..1242791 (+) | 216 | WP_001025404.1 | MW1434 family type I TA system toxin | - |
| FD482_RS05880 (FD482_06075) | - | 1242780..1243109 (-) | 330 | WP_000128907.1 | hypothetical protein | - |
| FD482_RS05885 (FD482_06080) | - | 1243160..1243912 (+) | 753 | WP_001148605.1 | phage antirepressor KilAC domain-containing protein | - |
| FD482_RS05890 (FD482_06085) | - | 1243928..1244125 (+) | 198 | WP_001148862.1 | hypothetical protein | - |
| FD482_RS05895 (FD482_06090) | - | 1244112..1244492 (-) | 381 | WP_000762521.1 | DUF2513 domain-containing protein | - |
| FD482_RS05900 (FD482_06095) | - | 1244547..1244870 (+) | 324 | WP_001120201.1 | DUF771 domain-containing protein | - |
| FD482_RS05905 (FD482_06100) | - | 1244867..1245028 (+) | 162 | WP_000048129.1 | DUF1270 family protein | - |
| FD482_RS05910 (FD482_06105) | - | 1245123..1245425 (+) | 303 | WP_000165371.1 | DUF2482 family protein | - |
| FD482_RS05915 (FD482_06110) | - | 1245430..1245690 (+) | 261 | WP_000291510.1 | DUF1108 family protein | - |
| FD482_RS05920 (FD482_06115) | - | 1245699..1245962 (+) | 264 | WP_001205732.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 237 a.a. Molecular weight: 27017.58 Da Isoelectric Point: 5.0545
>NTDB_id=320308 FD482_RS05860 WP_001031454.1 1241451..1242164(-) (irvR) [Staphylococcus aureus strain GD487]
MNKERNIIIAKNIRKFLNDSNMSQKKLAELINIKPSTLSDYLNLRSNPSHGVIQRIADVFEVGKSDIDTTYKDDNDITSI
YNKLTPPRQENVLNYANEQLEEQNSKGDNVVDINSYKQEKTPVNVNGCVSAGVGERLHDETLFTEMVKGPIPTHDLALKV
NGDSMEPMFKDGEIIFVEKTHNIKNGQIGIFIIEEEAYVKKVFVEDDRLTLVSLNKDYDDLHFYRNESVRLIGKVIL
MNKERNIIIAKNIRKFLNDSNMSQKKLAELINIKPSTLSDYLNLRSNPSHGVIQRIADVFEVGKSDIDTTYKDDNDITSI
YNKLTPPRQENVLNYANEQLEEQNSKGDNVVDINSYKQEKTPVNVNGCVSAGVGERLHDETLFTEMVKGPIPTHDLALKV
NGDSMEPMFKDGEIIFVEKTHNIKNGQIGIFIIEEEAYVKKVFVEDDRLTLVSLNKDYDDLHFYRNESVRLIGKVIL
Nucleotide
Download Length: 714 bp
>NTDB_id=320308 FD482_RS05860 WP_001031454.1 1241451..1242164(-) (irvR) [Staphylococcus aureus strain GD487]
ATGAACAAAGAAAGAAATATTATTATAGCCAAAAACATTAGAAAATTTCTCAACGATTCAAATATGTCTCAAAAGAAACT
TGCTGAACTCATTAACATAAAACCATCTACTTTAAGCGATTATTTAAATTTACGTTCCAACCCCTCTCACGGCGTTATAC
AAAGGATAGCTGATGTTTTCGAGGTTGGTAAAAGCGACATAGATACTACATACAAAGACGATAACGACATCACTTCCATA
TACAACAAACTCACACCTCCCCGCCAAGAAAACGTACTTAACTATGCAAATGAACAATTGGAAGAACAGAATTCTAAAGG
AGATAACGTTGTAGATATTAATTCATATAAACAGGAGAAAACTCCAGTTAACGTCAATGGTTGCGTCTCTGCTGGTGTAG
GAGAACGTTTACACGATGAAACGCTATTTACTGAAATGGTTAAAGGACCTATCCCCACACACGATTTAGCGTTAAAAGTA
AATGGTGATTCTATGGAACCTATGTTTAAAGATGGCGAAATCATATTTGTGGAGAAAACTCACAATATAAAGAATGGACA
AATTGGTATATTCATCATTGAAGAAGAAGCGTACGTTAAGAAAGTCTTTGTTGAAGATGATAGATTGACTCTAGTTTCAC
TAAATAAAGATTACGACGATCTGCACTTTTATAGAAATGAAAGTGTGAGGTTAATTGGAAAAGTTATTTTATAA
ATGAACAAAGAAAGAAATATTATTATAGCCAAAAACATTAGAAAATTTCTCAACGATTCAAATATGTCTCAAAAGAAACT
TGCTGAACTCATTAACATAAAACCATCTACTTTAAGCGATTATTTAAATTTACGTTCCAACCCCTCTCACGGCGTTATAC
AAAGGATAGCTGATGTTTTCGAGGTTGGTAAAAGCGACATAGATACTACATACAAAGACGATAACGACATCACTTCCATA
TACAACAAACTCACACCTCCCCGCCAAGAAAACGTACTTAACTATGCAAATGAACAATTGGAAGAACAGAATTCTAAAGG
AGATAACGTTGTAGATATTAATTCATATAAACAGGAGAAAACTCCAGTTAACGTCAATGGTTGCGTCTCTGCTGGTGTAG
GAGAACGTTTACACGATGAAACGCTATTTACTGAAATGGTTAAAGGACCTATCCCCACACACGATTTAGCGTTAAAAGTA
AATGGTGATTCTATGGAACCTATGTTTAAAGATGGCGAAATCATATTTGTGGAGAAAACTCACAATATAAAGAATGGACA
AATTGGTATATTCATCATTGAAGAAGAAGCGTACGTTAAGAAAGTCTTTGTTGAAGATGATAGATTGACTCTAGTTTCAC
TAAATAAAGATTACGACGATCTGCACTTTTATAGAAATGAAAGTGTGAGGTTAATTGGAAAAGTTATTTTATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| irvR | Streptococcus mutans UA159 |
33.929 |
100 |
0.401 |