Detailed information NTG0320285

Bioinformatically predicted

Overview

• Name: comEC/comE3
• Type: Machinery gene
• Locus tag: D4H71_RS00755
• Genome accession: NZ_CP032910
• Coordinates: 161919..163232 (+)
• Length: 437 a.a.
• NCBI ID: WP_201736976.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain 20-A-EK1
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 156919..168232

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D4H71_RS00735	crdR	157239..157880 (+)	642	WP_139547800.1	copper response regulator transcription factor CrdR	-
D4H71_RS00740	crdS	157846..159048 (+)	1203	WP_139547801.1	copper-sensing histidine kinase CrdS	-
D4H71_RS00745	-	159051..160445 (+)	1395	WP_139547802.1	NAD(P)H-hydrate dehydratase	-
D4H71_RS00750	-	160456..161922 (+)	1467	WP_108271590.1	replicative DNA helicase	-
D4H71_RS00755	comEC/comE3	161919..163232 (+)	1314	WP_201736976.1	ComEC/Rec2 family competence protein	Machinery gene
D4H71_RS00760	mqnP	163259..164143 (+)	885	WP_139547803.1	menaquinone biosynthesis prenyltransferase MqnP	-
D4H71_RS00765	-	164136..164630 (+)	495	WP_181372354.1	hypothetical protein	-
D4H71_RS00770	-	164643..165149 (+)	507	WP_139547804.1	helix-turn-helix domain-containing protein	-
D4H71_RS00775	-	165143..165946 (+)	804	WP_139547805.1	phosphatidylserine decarboxylase	-
D4H71_RS00780	nadA	165936..166946 (+)	1011	WP_139547806.1	quinolinate synthase NadA	-
D4H71_RS00785	nadC	166946..167767 (+)	822	WP_139547807.1	carboxylating nicotinate-nucleotide diphosphorylase	-

Sequence

Protein

• Length: 437 a.a.
• Molecular weight: 50225.11 Da
• Isoelectric Point: 9.9068

>NTDB_id=320285 D4H71_RS00755 WP_201736976.1 161919..163232(+) (comEC/comE3) [Helicobacter pylori strain 20-A-EK1]
MKDKTFQGAFELLTTPKEYLLCGVVLSLLLAINLYLEYLNYQKLDFSKPTNLNAQILLQYPKTKDQKTYFVLKLQSKNMI
FYTTIKEPLKNLQYRHAQFFGKFKPCSFLESLKSCFFQTYSFSLTRKQDFKSHWRHFIDSAHSSALVGNLYRALFIGDSL
NKDLRDRANALGINHLLAISGFHLGILSVSVYFLFSLFYTPLQKRYFPYRNAFYDIGVLVWVFLLGYLLLLDFLPSFFRA
FLMGLLGFLACFFGVRLLSFKLLILACCIAIALLPKLLFSVGFLLSVCGVWYIFLFLKHTQAFFKTSSFLARSFQAISLS
ALVFLNMLIIAHAFFPMFSPYQLFSIPLGLIFIVFFPLSLFLHAVGLGSLLDRLLNMPLTIPTISIPSPLWLLGAHLFLT
ILSARFFKVYLSMNVLSVGFFLYCCYQYIIMPSSIVG

Nucleotide

• Length: 1314 bp

>NTDB_id=320285 D4H71_RS00755 WP_201736976.1 161919..163232(+) (comEC/comE3) [Helicobacter pylori strain 20-A-EK1]
TTGAAAGACAAAACTTTTCAGGGGGCGTTTGAACTTCTTACGACCCCCAAAGAATACTTGTTGTGTGGGGTTGTTTTAAG
CCTTTTGTTGGCAATCAATCTTTATTTAGAATACTTGAATTACCAAAAGCTTGATTTTTCAAAACCTACAAACTTGAACG
CTCAAATCTTGTTGCAATACCCTAAAACTAAAGATCAAAAAACCTATTTTGTTTTAAAGCTCCAATCAAAAAACATGATC
TTTTACACCACCATTAAAGAGCCTTTAAAAAACCTCCAATACCGCCACGCGCAATTTTTTGGTAAGTTCAAACCTTGCTC
GTTCTTAGAGTCTCTAAAATCATGCTTTTTTCAAACTTATTCTTTTTCTTTAACGCGAAAACAAGATTTCAAATCGCATT
GGCGCCATTTCATTGACAGCGCTCATTCAAGCGCTTTAGTGGGTAATTTGTATCGCGCGTTATTTATAGGGGATAGCTTG
AATAAAGACTTAAGAGATAGGGCTAACGCGCTAGGGATCAACCACTTACTGGCCATTAGCGGGTTCCATTTAGGGATTTT
GAGCGTTAGCGTGTATTTTCTTTTCTCTCTTTTTTATACCCCCTTACAAAAACGCTATTTCCCTTATAGGAACGCTTTTT
ATGATATAGGGGTTTTGGTGTGGGTTTTTTTGCTAGGGTATTTGTTGCTGTTAGATTTTTTACCCTCTTTTTTCAGGGCG
TTTTTGATGGGCTTATTAGGGTTTTTGGCATGCTTTTTTGGGGTAAGGCTTTTGAGTTTTAAACTTTTGATTTTAGCGTG
CTGTATCGCCATAGCGTTACTCCCTAAATTGCTTTTTAGCGTGGGGTTTTTACTTTCTGTTTGTGGGGTGTGGTATATCT
TTTTATTTTTAAAACACACTCAAGCCTTTTTTAAAACCTCTTCTTTTTTGGCGCGATCTTTTCAAGCCATAAGCTTAAGC
GCACTGGTGTTTTTGAACATGCTCATTATCGCGCATGCCTTTTTCCCTATGTTTTCGCCCTACCAGCTCTTTAGCATTCC
TTTAGGCTTGATTTTTATCGTGTTTTTCCCTTTGAGTTTGTTTTTGCATGCTGTGGGTTTGGGGTCTTTGTTGGATCGCC
TTTTAAACATGCCTTTAACAATCCCTACGATTTCAATCCCTTCGCCTTTATGGCTTTTAGGGGCGCATTTATTTTTAACG
ATTTTAAGTGCGCGATTTTTTAAAGTTTATTTAAGCATGAATGTTTTGAGCGTGGGCTTTTTCTTGTATTGTTGCTATCA
ATATATTATAATGCCTAGTTCAATTGTAGGTTAG

Domains

Predicted by InterproScan.

• Competence protein (Competence) (159-378)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC/comE3	Helicobacter pylori 26695	96.339	100	0.963