Detailed information NTG0320272

Bioinformatically predicted

Overview

• Name: comEC/comE3
• Type: Machinery gene
• Locus tag: D4I01_RS06745
• Genome accession: NZ_CP032909
• Coordinates: 1364115..1365428 (-)
• Length: 437 a.a.
• NCBI ID: WP_201737883.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain 21-A-EK1
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1359115..1370428

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D4I01_RS06715	nadC	1359584..1360405 (-)	822	WP_139543409.1	carboxylating nicotinate-nucleotide diphosphorylase	-
D4I01_RS06720	nadA	1360405..1361409 (-)	1005	WP_139543410.1	quinolinate synthase NadA	-
D4I01_RS06725	-	1361399..1362202 (-)	804	WP_139543411.1	phosphatidylserine decarboxylase	-
D4I01_RS06730	-	1362196..1362702 (-)	507	WP_139543412.1	helix-turn-helix domain-containing protein	-
D4I01_RS06735	-	1362715..1363209 (-)	495	WP_201737882.1	hypothetical protein	-
D4I01_RS06740	mqnP	1363202..1364044 (-)	843	WP_236635043.1	menaquinone biosynthesis prenyltransferase MqnP	-
D4I01_RS06745	comEC/comE3	1364115..1365428 (-)	1314	WP_201737883.1	ComEC/Rec2 family competence protein	Machinery gene
D4I01_RS06750	-	1365425..1366891 (-)	1467	WP_000349729.1	replicative DNA helicase	-
D4I01_RS06755	-	1366902..1368296 (-)	1395	WP_139543415.1	NAD(P)H-hydrate dehydratase	-
D4I01_RS06760	crdS	1368299..1369501 (-)	1203	WP_139543416.1	copper-sensing histidine kinase CrdS	-
D4I01_RS06765	crdR	1369467..1370108 (-)	642	WP_139543417.1	copper response regulator transcription factor CrdR	-

Sequence

Protein

• Length: 437 a.a.
• Molecular weight: 50228.16 Da
• Isoelectric Point: 9.9070

>NTDB_id=320272 D4I01_RS06745 WP_201737883.1 1364115..1365428(-) (comEC/comE3) [Helicobacter pylori strain 21-A-EK1]
MKDKTFQGAFELLSTPKEYLWCGVVLSLLLAINLYLEYLNYQKLDFSKPTSLNAQILLQYPKTKDQKTYFVLKLQSKGMI
FYTTIKEPLKNLQYRHAQFFGKIKSCSFLESLKSCFFQTYSFSLTRKHNFKSHWHHFIDSAHSNALVGNLYRALFIGDSL
NKDLRDRANALGINHLLAISGFHLGILSASVYFLFSLFYTPLQKRYFPYRNAFYDIGVLVWVFLLGYLLLLDFLPSFFRA
FLMGLLGFLACFFGVRLLSFKLLILACCIAIALLPKLLFSVGFLLSVCGVWYIFLFLKHTQIFFKTSSFLRRSFQVISLS
VLVFLNMLIIAHAFFPMFSPYQLFSIPLGLIFIVFFPLSLLLHAVGLGSLLDHLLNMPLIIPTISVSSPLWLLGVHLFLT
ILSARSFKVYLSMNVLSAGFFLYCCYQYIIMPSLIVG

Nucleotide

• Length: 1314 bp

>NTDB_id=320272 D4I01_RS06745 WP_201737883.1 1364115..1365428(-) (comEC/comE3) [Helicobacter pylori strain 21-A-EK1]
TTGAAAGACAAAACCTTTCAGGGGGCGTTTGAACTTCTTTCAACCCCCAAAGAATACTTATGGTGTGGGGTTGTTTTAAG
CCTTTTGTTGGCAATCAATCTTTATTTAGAATACTTGAATTACCAAAAGCTTGATTTTTCAAAACCTACAAGCCTGAACG
CTCAAATCTTGTTACAATACCCTAAAACGAAAGATCAAAAAACCTATTTTGTCTTAAAGCTCCAATCAAAGGGCATGATC
TTTTATACCACTATTAAAGAGCCTTTAAAAAACCTCCAATACCGCCATGCACAATTTTTTGGTAAGATCAAATCTTGTTC
GTTCTTAGAGTCTCTAAAATCATGCTTTTTTCAAACTTATTCTTTTTCTTTAACACGAAAACACAATTTTAAATCGCATT
GGCACCATTTCATTGACAGCGCTCATTCCAACGCTTTGGTGGGTAATTTGTATCGCGCGTTATTTATAGGGGATAGCTTG
AATAAAGACTTAAGAGATAGGGCTAACGCGCTAGGGATCAACCACTTACTAGCCATTAGCGGGTTTCATTTAGGGATTTT
GAGCGCGAGCGTGTATTTTCTTTTTTCGCTTTTTTATACCCCCTTACAAAAACGCTATTTCCCTTACAGGAACGCTTTTT
ATGATATAGGGGTTTTGGTGTGGGTTTTTTTGCTGGGGTATTTATTGCTATTAGATTTTTTACCCTCTTTTTTCAGGGCG
TTTTTAATGGGCTTATTAGGGTTTTTGGCATGCTTTTTTGGGGTAAGGCTTTTGAGTTTTAAACTTTTGATTTTAGCGTG
CTGTATCGCCATAGCGTTACTCCCTAAATTGCTTTTTAGCGTGGGGTTTTTGCTTTCTGTGTGTGGGGTGTGGTATATCT
TTTTGTTTTTAAAACACACTCAAATTTTTTTTAAAACCTCTTCTTTTTTAAGGCGATCTTTTCAAGTCATAAGCTTAAGC
GTGCTGGTGTTTTTAAACATGCTCATTATTGCGCATGCCTTTTTCCCTATGTTTTCGCCCTACCAGCTCTTTAGCATTCC
TTTAGGCTTGATTTTTATCGTGTTTTTCCCTTTGAGTTTACTCTTGCATGCGGTGGGTTTGGGGTCTTTATTGGATCACC
TTTTAAACATGCCTTTAATAATCCCTACGATTTCGGTTTCTTCACCCTTATGGCTTTTAGGGGTGCATTTATTTTTAACG
ATTTTAAGCGCGCGTTCTTTTAAAGTTTATTTAAGCATGAATGTTTTAAGCGCGGGCTTTTTCTTGTATTGTTGCTATCA
ATATATTATAATGCCTAGCTTAATTGTAGGTTAG

Domains

Predicted by InterproScan.

• Competence protein (Competence) (159-392)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC/comE3	Helicobacter pylori 26695	94.966	100	0.95