Detailed information NTG0320260

Bioinformatically predicted

Overview

• Name: comEC/comE3
• Type: Machinery gene
• Locus tag: D4I31_RS07805
• Genome accession: NZ_CP032908
• Coordinates: 1595501..1596814 (-)
• Length: 437 a.a.
• NCBI ID: WP_201738134.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain 23-A-EK1
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1590501..1601814

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D4I31_RS07775	nadC	1590966..1591787 (-)	822	WP_139535206.1	carboxylating nicotinate-nucleotide diphosphorylase	-
D4I31_RS07780	nadA	1591787..1592797 (-)	1011	WP_139535207.1	quinolinate synthase NadA	-
D4I31_RS07785	-	1592787..1593590 (-)	804	WP_139535208.1	phosphatidylserine decarboxylase	-
D4I31_RS07790	-	1593584..1594090 (-)	507	WP_000953098.1	hypothetical protein	-
D4I31_RS07795	-	1594103..1594597 (-)	495	WP_201738133.1	hypothetical protein	-
D4I31_RS07800	mqnP	1594590..1595474 (-)	885	WP_139535210.1	menaquinone biosynthesis prenyltransferase MqnP	-
D4I31_RS07805	comEC/comE3	1595501..1596814 (-)	1314	WP_201738134.1	ComEC/Rec2 family competence protein	Machinery gene
D4I31_RS07810	-	1596811..1598277 (-)	1467	WP_139535211.1	replicative DNA helicase	-
D4I31_RS07815	-	1598288..1599682 (-)	1395	WP_139535212.1	NAD(P)H-hydrate dehydratase	-
D4I31_RS07820	crdS	1599685..1600887 (-)	1203	WP_139535213.1	copper-sensing histidine kinase CrdS	-
D4I31_RS07825	crdR	1600853..1601494 (-)	642	WP_077643521.1	copper response regulator transcription factor CrdR	-

Sequence

Protein

• Length: 437 a.a.
• Molecular weight: 50162.07 Da
• Isoelectric Point: 9.9070

>NTDB_id=320260 D4I31_RS07805 WP_201738134.1 1595501..1596814(-) (comEC/comE3) [Helicobacter pylori strain 23-A-EK1]
MKDKTFQGAFELLSTPKEYLWCGVFLSLLLAINLYLEYLNYQKLDFSKPTSLNAQILLQYPKTKDQKTYFVLKLQSKGMI
FYTTIKEPLKNLQYRHAQFFGKIKPCSFLESLKSCFFQTYSFSLTRKHNFKSHLRHFIDSVHSNALVGNLYRALFIGDSL
NKDLRDRANALGINHLLAISGFHLGILSASVYFLFSLFYTPLQKRYFPYRNAFYDIGVLVWVFLLGYLLLLDFLPSFFRA
FLMGLLGFLACFFGVRLLSFKLLILACCIAIALLPKLLFSVGFLLSVCGVWYIFLFLKHTQAFFKTSSFLMRSFQVISLS
ALVFLNMLIVAHAFFPMFSPYQLFSIPLGLIFIVFFPLSLFLHAVGLGSLLDHILSMPLTIPTISVPSPLWLLGAHLFLT
ILSARFFKVYLSMNVLSAGFFLYCCYQYIIMPSSIVG

Nucleotide

• Length: 1314 bp

>NTDB_id=320260 D4I31_RS07805 WP_201738134.1 1595501..1596814(-) (comEC/comE3) [Helicobacter pylori strain 23-A-EK1]
TTGAAAGATAAAACTTTTCAGGGGGCGTTTGAACTTCTTTCAACCCCCAAAGAATACTTATGGTGTGGGGTGTTTTTAAG
CCTTTTGTTGGCAATCAATCTTTATTTAGAATACTTGAATTACCAAAAGCTTGATTTTTCAAAACCTACAAGCTTGAACG
CTCAAATCTTATTACAATACCCTAAAACGAAAGATCAAAAAACCTATTTTGTTTTAAAACTCCAATCAAAGGGCATGATC
TTTTACACCACCATTAAAGAGCCTTTAAAAAACCTCCAATACCGCCATGCGCAATTTTTTGGCAAAATCAAGCCTTGCTC
GTTCTTAGAGTCTCTAAAATCATGCTTTTTTCAAACTTATTCTTTTTCTTTAACACGAAAACACAATTTTAAATCGCATT
TGCGCCATTTCATTGACAGCGTTCATTCCAACGCTTTAGTGGGCAATTTGTATCGAGCACTTTTTATAGGGGATAGCTTG
AATAAAGATTTGAGAGACAGGGCTAACGCGCTAGGGATCAACCACTTACTAGCCATTAGCGGGTTTCATTTAGGGATTTT
GAGCGCAAGCGTGTATTTTCTTTTTTCGCTTTTTTATACCCCCTTACAAAAACGCTATTTCCCTTATAGGAACGCTTTTT
ATGATATAGGGGTTTTGGTGTGGGTTTTTTTGCTGGGGTATTTGTTGCTATTGGATTTTTTACCCTCTTTTTTCAGGGCG
TTTTTAATGGGCTTATTAGGGTTTTTGGCATGCTTTTTTGGGGTAAGGCTTTTGAGTTTTAAACTTTTGATTTTAGCGTG
CTGTATCGCTATAGCGTTACTCCCTAAATTGCTTTTTAGCGTGGGGTTTTTGCTTTCTGTTTGTGGGGTGTGGTATATCT
TTTTATTTTTAAAACACACTCAAGCCTTTTTTAAAACCTCTTCTTTTTTGATGCGATCTTTTCAAGTCATAAGCTTAAGC
GCGCTAGTGTTTTTGAACATGCTCATTGTTGCACATGCCTTTTTCCCCATGTTTTCGCCCTACCAGCTCTTTAGCATTCC
TTTAGGCTTGATTTTTATCGTGTTTTTCCCTTTGAGTTTGTTCTTGCATGCGGTGGGTTTGGGGTCTTTATTGGATCATA
TTTTAAGCATGCCTTTAACCATCCCCACGATCTCGGTTCCTTCGCCCTTATGGCTTTTAGGGGCGCATTTGTTTTTAACG
ATTTTAAGTGCGCGTTTTTTTAAGGTTTATTTAAGCATGAATGTTTTAAGTGCGGGCTTTTTCTTGTATTGTTGCTATCA
ATATATTATAATGCCTAGTTCAATTGTAGGTTAG

Domains

Predicted by InterproScan.

• Competence protein (Competence) (159-378)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC/comE3	Helicobacter pylori 26695	95.652	100	0.957