Detailed information NTG0320239

Bioinformatically predicted

Overview

• Name: comEC/comE3
• Type: Machinery gene
• Locus tag: D4I62_RS07690
• Genome accession: NZ_CP032907
• Coordinates: 1577985..1579298 (-)
• Length: 437 a.a.
• NCBI ID: WP_201738031.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain 24-A-EK1
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1572985..1584298

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D4I62_RS07660	nadC	1573448..1574269 (-)	822	WP_139533836.1	carboxylating nicotinate-nucleotide diphosphorylase	-
D4I62_RS07665	nadA	1574269..1575279 (-)	1011	WP_139533837.1	quinolinate synthase NadA	-
D4I62_RS07670	-	1575269..1576072 (-)	804	WP_139533838.1	phosphatidylserine decarboxylase	-
D4I62_RS07675	-	1576066..1576572 (-)	507	WP_000953105.1	hypothetical protein	-
D4I62_RS07680	-	1576585..1577079 (-)	495	WP_201738030.1	hypothetical protein	-
D4I62_RS07685	mqnP	1577072..1577914 (-)	843	WP_236640016.1	menaquinone biosynthesis prenyltransferase MqnP	-
D4I62_RS07690	comEC/comE3	1577985..1579298 (-)	1314	WP_201738031.1	ComEC/Rec2 family competence protein	Machinery gene
D4I62_RS07695	-	1579295..1580755 (-)	1461	WP_115019547.1	replicative DNA helicase	-
D4I62_RS07700	-	1580766..1582166 (-)	1401	WP_139533841.1	NAD(P)H-hydrate dehydratase	-
D4I62_RS07705	crdS	1582169..1583371 (-)	1203	WP_139533842.1	copper-sensing histidine kinase CrdS	-
D4I62_RS07710	crdR	1583337..1583978 (-)	642	WP_139533843.1	copper response regulator transcription factor CrdR	-

Sequence

Protein

• Length: 437 a.a.
• Molecular weight: 50086.88 Da
• Isoelectric Point: 9.8572

>NTDB_id=320239 D4I62_RS07690 WP_201738031.1 1577985..1579298(-) (comEC/comE3) [Helicobacter pylori strain 24-A-EK1]
MKDKTFQGAFELLATPKEYLWCGVFLSLLLAINLYLEYLNYQRLDFSKPTSLNAQILLQYPKTKDQKTYFVLKLQSKGMI
FYTTIKEPLKNLQYRHAQFFGKIKPCSFLESLKSCFFQTYSFSLTRKQDFKSHWRHFIDSAHSNALVGNLYRALFIGDSL
NKDLRDRANALGINHLLAISGFHLGILSASVYFLFSLFYIPLQKRYFPYRNAFYDIGVLVWVFLLGYLLLLDFLPSFFRA
FLMGLLGFLACFFGVRLLSFKLLVLACCIAIALLPKLLFSVGFLLSVCGVWYIFLFLKHTQAFFKTSSFLARSFQAISLS
ALVFLNILIIVHAFFPMFSPYQLFSIPLGLIFIVFFPLSLFLHAVGLGSLLDHILSMPLTIPAISISSPLWLLGVHLFLT
ILSARSFKVYLSMNVLSAGFFLYCCYQYIIMPSSIVG

Nucleotide

• Length: 1314 bp

>NTDB_id=320239 D4I62_RS07690 WP_201738031.1 1577985..1579298(-) (comEC/comE3) [Helicobacter pylori strain 24-A-EK1]
TTGAAAGATAAAACTTTTCAGGGGGCGTTTGAACTTCTTGCAACCCCCAAAGAATACTTATGGTGTGGGGTGTTTTTAAG
CCTTTTGTTGGCGATCAACCTTTATTTAGAATACTTGAATTACCAAAGGCTTGATTTTTCAAAACCTACAAGCCTGAACG
CTCAAATCTTGTTGCAATACCCTAAGACTAAAGATCAAAAAACCTATTTTGTCTTAAAGCTCCAATCAAAGGGCATGATT
TTTTACACCACCATTAAAGAGCCTTTAAAAAACCTCCAATACCGCCATGCGCAATTTTTTGGCAAAATCAAACCTTGCTC
GTTCTTAGAGTCTCTAAAATCATGCTTTTTTCAAACCTATTCTTTTTCTTTAACACGAAAGCAAGATTTTAAATCGCATT
GGCGCCATTTCATTGACAGCGCTCATTCCAACGCTTTAGTGGGTAATTTGTATCGTGCGTTATTTATAGGGGATAGCCTG
AATAAAGATTTAAGAGATAGGGCTAACGCGCTAGGGATTAACCACTTACTAGCCATTAGCGGGTTCCATTTAGGGATTTT
GAGCGCAAGCGTGTATTTTCTTTTCTCTCTTTTTTACATTCCCTTACAAAAACGCTATTTCCCTTATAGGAACGCTTTTT
ATGATATAGGGGTTTTGGTGTGGGTTTTTTTGCTAGGGTATTTGTTGCTATTGGATTTTTTACCCTCTTTTTTCAGGGCG
TTTTTAATGGGCTTATTAGGGTTTTTGGCATGCTTTTTTGGGGTAAGGCTTTTGAGTTTTAAACTTTTGGTTTTAGCGTG
CTGTATCGCCATAGCGTTACTCCCTAAATTGCTTTTTAGCGTGGGGTTTTTGCTTTCTGTTTGTGGGGTGTGGTATATCT
TTTTATTCTTAAAACACACTCAAGCCTTTTTTAAAACCTCTTCTTTTTTGGCACGATCTTTTCAAGCCATAAGCTTAAGC
GCGCTGGTGTTTTTGAACATACTCATCATTGTGCATGCCTTTTTCCCTATGTTTTCGCCCTACCAGCTCTTTAGCATTCC
TTTAGGCTTGATTTTTATCGTGTTTTTCCCTTTGAGTTTGTTCTTGCATGCGGTGGGTTTGGGGTCTTTATTGGATCATA
TTCTAAGCATGCCTTTAACAATCCCTGCGATTTCAATCTCTTCACCCTTATGGCTTTTAGGGGTGCATTTATTTTTAACG
ATTTTAAGTGCACGTTCTTTTAAAGTTTATTTAAGCATGAATGTTTTAAGCGCAGGCTTTTTCTTGTATTGTTGCTATCA
ATATATTATAATGCCTAGCTCAATTGTAGGTTAG

Domains

Predicted by InterproScan.

• Competence protein (Competence) (159-398)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC/comE3	Helicobacter pylori 26695	95.423	100	0.954