Detailed information
Bioinformatically predicted
Overview
| Name | letA | Type | Regulator |
| Locus tag | FDZ90_RS08840 | Genome accession | NZ_CP040172 |
| Coordinates | 1758701..1759345 (-) | Length | 214 a.a. |
| NCBI ID | WP_001890391.1 | Uniprot ID | Q9KSP3 |
| Organism | Vibrio cholerae strain VC1374 | ||
| Function | regulate competence development (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1753701..1764345
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FDZ90_RS08800 (FDZ90_09080) | - | 1753771..1754256 (+) | 486 | WP_001261948.1 | GNAT family N-acetyltransferase | - |
| FDZ90_RS08805 (FDZ90_09085) | - | 1754253..1755371 (-) | 1119 | WP_001190450.1 | GGDEF domain-containing protein | - |
| FDZ90_RS08830 (FDZ90_09110) | pgsA | 1756264..1756821 (-) | 558 | WP_001211977.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| FDZ90_RS08835 (FDZ90_09115) | uvrC | 1756869..1758701 (-) | 1833 | WP_000107095.1 | excinuclease ABC subunit UvrC | - |
| FDZ90_RS08840 (FDZ90_09120) | letA | 1758701..1759345 (-) | 645 | WP_001890391.1 | UvrY/SirA/GacA family response regulator transcription factor | Regulator |
| FDZ90_RS08845 (FDZ90_09125) | - | 1759721..1762084 (+) | 2364 | WP_000687840.1 | DNA polymerase II | - |
| FDZ90_RS08850 (FDZ90_09130) | - | 1762056..1764155 (-) | 2100 | WP_000948258.1 | PTS sugar transporter subunit IIC/EAL domain-containing protein | - |
Sequence
Protein
Download Length: 214 a.a. Molecular weight: 23751.50 Da Isoelectric Point: 6.4970
>NTDB_id=320224 FDZ90_RS08840 WP_001890391.1 1758701..1759345(-) (letA) [Vibrio cholerae strain VC1374]
MISVFLVDDHELVRTGIRRIIEDVRGMKVAGEADSGEEAVKWCRTNHADVILMDMNMPGIGGLEATKKLLRVNPDIKIIV
LTVHTENPFPTKVMQAGAAGYLTKGAAPDEMVNAIRIVHSGQRYISPEIAQQMALSQFSPASENPFADLSERELQIMLMI
TKGQKVTDISEQLSLSPKTVNSYRYRLFAKLNINGDVELTHLAIRHGILDTEKL
MISVFLVDDHELVRTGIRRIIEDVRGMKVAGEADSGEEAVKWCRTNHADVILMDMNMPGIGGLEATKKLLRVNPDIKIIV
LTVHTENPFPTKVMQAGAAGYLTKGAAPDEMVNAIRIVHSGQRYISPEIAQQMALSQFSPASENPFADLSERELQIMLMI
TKGQKVTDISEQLSLSPKTVNSYRYRLFAKLNINGDVELTHLAIRHGILDTEKL
Nucleotide
Download Length: 645 bp
>NTDB_id=320224 FDZ90_RS08840 WP_001890391.1 1758701..1759345(-) (letA) [Vibrio cholerae strain VC1374]
TTGATTAGTGTTTTCCTTGTAGATGATCACGAGCTGGTTCGCACAGGGATACGACGTATTATTGAAGACGTCCGTGGAAT
GAAAGTAGCAGGGGAAGCTGACAGCGGTGAAGAAGCAGTAAAATGGTGCCGTACTAACCATGCGGATGTCATTTTAATGG
ATATGAACATGCCGGGTATTGGTGGCTTGGAAGCAACCAAGAAGCTGTTGCGTGTTAATCCGGACATTAAAATTATCGTA
TTGACGGTACATACCGAAAATCCGTTCCCAACCAAAGTGATGCAAGCGGGTGCCGCAGGTTATCTCACGAAGGGCGCGGC
ACCGGATGAAATGGTCAATGCGATCCGTATCGTTCACAGCGGTCAGCGTTACATTTCTCCAGAAATTGCGCAGCAAATGG
CGTTGAGTCAGTTTTCGCCCGCCTCTGAAAATCCTTTTGCTGATCTCTCCGAGCGTGAATTGCAGATCATGTTAATGATC
ACCAAAGGCCAGAAGGTGACGGACATTTCCGAACAGCTCAGTTTGAGCCCGAAAACCGTCAACAGCTACCGCTACCGTTT
GTTCGCCAAGCTGAATATCAACGGTGATGTGGAATTAACCCACTTAGCTATCCGACACGGGATCTTAGATACTGAGAAGT
TATAG
TTGATTAGTGTTTTCCTTGTAGATGATCACGAGCTGGTTCGCACAGGGATACGACGTATTATTGAAGACGTCCGTGGAAT
GAAAGTAGCAGGGGAAGCTGACAGCGGTGAAGAAGCAGTAAAATGGTGCCGTACTAACCATGCGGATGTCATTTTAATGG
ATATGAACATGCCGGGTATTGGTGGCTTGGAAGCAACCAAGAAGCTGTTGCGTGTTAATCCGGACATTAAAATTATCGTA
TTGACGGTACATACCGAAAATCCGTTCCCAACCAAAGTGATGCAAGCGGGTGCCGCAGGTTATCTCACGAAGGGCGCGGC
ACCGGATGAAATGGTCAATGCGATCCGTATCGTTCACAGCGGTCAGCGTTACATTTCTCCAGAAATTGCGCAGCAAATGG
CGTTGAGTCAGTTTTCGCCCGCCTCTGAAAATCCTTTTGCTGATCTCTCCGAGCGTGAATTGCAGATCATGTTAATGATC
ACCAAAGGCCAGAAGGTGACGGACATTTCCGAACAGCTCAGTTTGAGCCCGAAAACCGTCAACAGCTACCGCTACCGTTT
GTTCGCCAAGCTGAATATCAACGGTGATGTGGAATTAACCCACTTAGCTATCCGACACGGGATCTTAGATACTGAGAAGT
TATAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| letA | Legionella pneumophila str. Paris |
51.905 |
98.131 |
0.509 |
| letA | Legionella pneumophila strain ERS1305867 |
51.905 |
98.131 |
0.509 |