Detailed information NTG0320211

Bioinformatically predicted

Overview

• Name: comEC/comE3
• Type: Machinery gene
• Locus tag: D4I92_RS06760
• Genome accession: NZ_CP032906
• Coordinates: 1367587..1368900 (-)
• Length: 437 a.a.
• NCBI ID: WP_201736747.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain 25-A-EK1
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1362587..1373900

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D4I92_RS06725	-	1362891..1363025 (-)	135	WP_120814840.1	DNA methyltransferase	-
D4I92_RS06730	nadC	1363050..1363871 (-)	822	WP_139519805.1	carboxylating nicotinate-nucleotide diphosphorylase	-
D4I92_RS06735	nadA	1363871..1364881 (-)	1011	WP_139519807.1	quinolinate synthase NadA	-
D4I92_RS06740	-	1364871..1365674 (-)	804	WP_139519808.1	phosphatidylserine decarboxylase	-
D4I92_RS06745	-	1365668..1366174 (-)	507	WP_000953098.1	hypothetical protein	-
D4I92_RS06750	-	1366187..1366681 (-)	495	WP_201736746.1	hypothetical protein	-
D4I92_RS06755	mqnP	1366674..1367516 (-)	843	WP_236634801.1	menaquinone biosynthesis prenyltransferase MqnP	-
D4I92_RS06760	comEC/comE3	1367587..1368900 (-)	1314	WP_201736747.1	ComEC/Rec2 family competence protein	Machinery gene
D4I92_RS06765	-	1368897..1370363 (-)	1467	WP_097686770.1	replicative DNA helicase	-
D4I92_RS06770	-	1370374..1371768 (-)	1395	WP_139519815.1	NAD(P)H-hydrate dehydratase	-
D4I92_RS06775	crdS	1371771..1372973 (-)	1203	WP_139519817.1	copper-sensing histidine kinase CrdS	-
D4I92_RS06780	crdR	1372939..1373580 (-)	642	WP_079368577.1	copper response regulator transcription factor CrdR	-

Sequence

Protein

• Length: 437 a.a.
• Molecular weight: 50272.25 Da
• Isoelectric Point: 9.9068

>NTDB_id=320211 D4I92_RS06760 WP_201736747.1 1367587..1368900(-) (comEC/comE3) [Helicobacter pylori strain 25-A-EK1]
MKDKTFQGAFELLTTPKEYLWCGVVLSLLLAINLYLEYLNYQKLDFSKPTSLNAQILLQYPKTKDQKTYFVLKLQSKGMI
FYTTIKEPLKNLQYRHAQFFGKIKPCSFLESLKSCFFQTYSFSLTRKQDFKSHVRHFIDSAHSNALVGNLYRALFIGDSL
NKDLRDRANALGINHLLAISGFHLGILSASVYFLFSLFYTPLQKRYFPYRNAFYDIGVLVWVFLLGYLLLLDFLPSFFRA
FLMGLLGFLACFFGVRILSFKLLILACCIAIALLPKLLFSVGFLLSVCGVWYIFLFLKHTQIFFKNSSFLRRSFQAIALS
VLVFLNMLIIVHAFFPMFSPYQLFSIPLGLIFIVFFPLSLFLHAVGLGSLLDHFLSMPLTIPTISVPSPLWLLGVHLFLT
ILSARFFKVYLSMNVLSAGFFLYCCYQYIIMPSLIVG

Nucleotide

• Length: 1314 bp

>NTDB_id=320211 D4I92_RS06760 WP_201736747.1 1367587..1368900(-) (comEC/comE3) [Helicobacter pylori strain 25-A-EK1]
TTGAAAGACAAAACTTTTCAGGGGGCGTTTGAACTTCTTACAACCCCCAAAGAATACTTATGGTGTGGGGTTGTTTTAAG
CCTTTTGTTGGCAATCAATCTTTATTTAGAATACTTGAATTACCAAAAGCTTGATTTTTCAAAACCTACGAGCCTGAACG
CTCAAATCTTGTTGCAATACCCTAAAACGAAAGATCAAAAAACCTATTTTGTCTTAAAACTCCAATCAAAGGGCATGATC
TTTTACACCACCATTAAAGAGCCTTTAAAAAACCTCCAATACCGCCATGCGCAATTTTTTGGCAAGATCAAGCCTTGCTC
ATTCTTAGAGTCTCTAAAATCATGCTTTTTTCAAACTTATTCTTTTTCTTTAACGCGAAAACAAGATTTCAAATCGCATG
TGCGCCATTTTATTGATAGCGCTCATTCCAACGCTTTAGTGGGTAATTTGTATCGCGCGTTATTTATAGGGGATAGCTTG
AATAAGGATTTAAGAGACAGGGCTAATGCGCTAGGGATCAACCACTTACTAGCCATCAGCGGGTTCCATTTAGGGATTTT
AAGCGCGAGCGTGTATTTTCTTTTTTCGCTTTTTTATACCCCCTTACAAAAACGCTATTTCCCTTACAGGAACGCTTTTT
ATGATATAGGGGTTTTGGTGTGGGTTTTTTTGCTGGGGTATTTATTGCTATTAGATTTTTTACCCTCTTTTTTTAGGGCG
TTTTTAATGGGCTTACTAGGGTTTTTGGCATGCTTTTTTGGGGTAAGGATTTTGAGTTTTAAACTTTTGATTTTAGCGTG
CTGTATCGCCATAGCGTTACTCCCTAAATTGCTTTTTAGTGTGGGGTTTTTGCTTTCTGTGTGTGGGGTGTGGTATATCT
TTTTATTCTTAAAACACACTCAAATTTTTTTTAAAAATTCTTCTTTTTTAAGGCGATCGTTTCAAGCGATCGCATTAAGC
GTGTTAGTGTTTTTGAACATGCTCATTATCGTGCATGCCTTTTTCCCTATGTTTTCGCCCTACCAGCTCTTTAGCATTCC
TTTAGGCTTGATTTTTATCGTGTTTTTCCCTTTGAGTTTGTTCTTGCATGCGGTGGGTTTAGGGTCTTTATTGGATCATT
TCTTAAGCATGCCTTTAACAATCCCTACGATTTCGGTTCCTTCGCCTTTATGGCTTTTAGGGGTGCATTTATTTTTAACG
ATTTTAAGCGCGCGATTTTTTAAAGTTTATTTAAGCATGAATGTTTTGAGCGCGGGCTTTTTCTTGTATTGTTGCTATCA
ATATATTATAATGCCTAGCTTAATTGTAGGTTAG

Domains

Predicted by InterproScan.

• Competence protein (Competence) (159-385)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC/comE3	Helicobacter pylori 26695	96.568	100	0.966