Detailed information NTG0320182

Bioinformatically predicted

Overview

• Name: comEC/comE3
• Type: Machinery gene
• Locus tag: D4J22_RS00840
• Genome accession: NZ_CP032905
• Coordinates: 175966..177279 (+)
• Length: 437 a.a.
• NCBI ID: WP_201736862.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain 26-A-EK1
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 170966..182279

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D4J22_RS00820	crdR	171280..171921 (+)	642	WP_139546819.1	copper response regulator transcription factor CrdR	-
D4J22_RS00825	crdS	171887..173089 (+)	1203	WP_139546820.1	copper-sensing histidine kinase CrdS	-
D4J22_RS00830	-	173092..174492 (+)	1401	WP_139546821.1	NAD(P)H-hydrate dehydratase	-
D4J22_RS00835	-	174503..175969 (+)	1467	WP_120838158.1	replicative DNA helicase	-
D4J22_RS00840	comEC/comE3	175966..177279 (+)	1314	WP_201736862.1	ComEC/Rec2 family competence protein	Machinery gene
D4J22_RS00845	mqnP	177306..178190 (+)	885	WP_139546822.1	menaquinone biosynthesis prenyltransferase MqnP	-
D4J22_RS00850	-	178183..178677 (+)	495	WP_201736863.1	hypothetical protein	-
D4J22_RS00855	-	178690..179196 (+)	507	WP_108327859.1	helix-turn-helix domain-containing protein	-
D4J22_RS00860	-	179190..179993 (+)	804	WP_139546824.1	phosphatidylserine decarboxylase	-
D4J22_RS00865	nadA	179983..180987 (+)	1005	WP_139546825.1	quinolinate synthase NadA	-
D4J22_RS00870	nadC	180987..181808 (+)	822	WP_139546826.1	carboxylating nicotinate-nucleotide diphosphorylase	-

Sequence

Protein

• Length: 437 a.a.
• Molecular weight: 50141.21 Da
• Isoelectric Point: 9.9068

>NTDB_id=320182 D4J22_RS00840 WP_201736862.1 175966..177279(+) (comEC/comE3) [Helicobacter pylori strain 26-A-EK1]
MKDKTFQGAFELLSTPKEYLVCGVILSLLLAINLYLEYLNYQKLDFSKPTSLNAQILLQYPKTKDQKTYFVLKLQSKGMI
FYTTIKEPLKNLQYRHAQFFGKIKFCSFLESIKSCFFQTYSFSLTRKQDFKSHVRHFIDSAHSSALVGNLYRALFIGDSL
NKDLRDRANALGINHLLAISGFHLGILSASVYFLFSLFYTPLQKRYFPYRNAFYDIGVLVWVFLLGYLLLLDFLPSFFRA
FLMGLLGFLACFFGVRILSFKLLVLACCIAIALLPKLLFSVGFLLSVCGVWYIFLFLKHTQIFFKISSFLARSFQAISLS
ALVFLNMLIIVHAFFPMFSPYQLFSIPLGLIFIVFFPLSLFLHAVGLGSLLDRLLSMPLTIPTISVPSPLWLLGVHLFLT
ILSARFFKVYLSMNVLSMGFFLYCCYQYIIMPSLIVG

Nucleotide

• Length: 1314 bp

>NTDB_id=320182 D4J22_RS00840 WP_201736862.1 175966..177279(+) (comEC/comE3) [Helicobacter pylori strain 26-A-EK1]
TTGAAAGACAAAACTTTTCAGGGGGCGTTTGAACTTCTTTCAACCCCCAAAGAATACTTGGTGTGTGGGGTTATTTTAAG
CCTTTTGTTGGCAATCAATCTTTATTTAGAATACTTGAATTACCAAAAGCTTGATTTTTCAAAACCTACAAGCTTAAACG
CTCAAATCTTATTACAATACCCTAAAACGAAAGATCAAAAAACCTATTTTGTTTTAAAGCTCCAATCAAAGGGCATGATC
TTTTACACCACCATTAAAGAGCCTTTAAAAAACCTCCAATACCGCCATGCACAATTTTTTGGCAAGATCAAATTTTGTTC
GTTCTTAGAGTCTATAAAATCATGCTTTTTTCAAACTTATTCTTTTTCTTTAACACGAAAACAGGATTTTAAATCGCATG
TGCGCCATTTCATTGACAGCGCTCATTCAAGCGCTTTAGTGGGTAATTTGTATCGCGCATTATTTATAGGGGATAGCTTG
AATAAAGATTTAAGAGATAGGGCTAACGCGCTAGGGATCAACCACTTACTAGCCATTAGCGGGTTCCATTTAGGGATTTT
GAGCGCGAGCGTGTATTTTCTTTTTTCGCTTTTTTATACCCCCTTACAAAAACGCTATTTCCCTTATAGGAACGCTTTTT
ATGATATAGGGGTTTTGGTGTGGGTTTTTTTGCTAGGGTATTTGTTGCTATTAGATTTTTTACCCTCTTTTTTCAGGGCG
TTTTTAATGGGCTTATTAGGGTTTTTGGCATGCTTTTTTGGGGTAAGGATCTTGAGTTTTAAGCTTTTGGTTTTAGCGTG
CTGTATCGCCATAGCGTTACTCCCTAAATTGCTTTTTAGCGTGGGGTTTTTGCTTTCTGTTTGTGGGGTGTGGTATATCT
TTTTATTTTTAAAACATACTCAAATTTTTTTTAAAATCTCTTCTTTTTTGGCGCGATCTTTTCAAGCCATAAGCTTAAGC
GCGCTAGTGTTTTTGAACATGCTCATTATTGTGCATGCCTTTTTCCCTATGTTTTCGCCCTACCAGCTCTTTAGCATTCC
TTTAGGCTTGATTTTTATCGTGTTTTTCCCTTTGAGTTTGTTCTTGCATGCTGTGGGTTTGGGGTCTTTGTTGGATCGCC
TTTTAAGCATGCCTTTAACAATCCCTACGATTTCGGTTCCTTCACCCTTATGGCTTTTAGGGGTGCATTTATTTTTAACG
ATTTTAAGCGCGCGTTTTTTTAAAGTTTATTTAAGCATGAATGTTTTAAGCATGGGCTTTTTCTTGTATTGTTGCTATCA
ATATATTATAATGCCTAGCTTAATTGTAGGTTAG

Domains

Predicted by InterproScan.

• Competence protein (Competence) (159-371)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC/comE3	Helicobacter pylori 26695	96.339	100	0.963