Detailed information NTG0320139

Bioinformatically predicted

Overview

• Name: comEC/comE3
• Type: Machinery gene
• Locus tag: D4K20_RS00745
• Genome accession: NZ_CP032903
• Coordinates: 162265..163578 (+)
• Length: 437 a.a.
• NCBI ID: WP_201737774.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain 173-A-EK1
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 157265..168578

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D4K20_RS00725	crdR	157585..158226 (+)	642	WP_001169751.1	copper response regulator transcription factor CrdR	-
D4K20_RS00730	crdS	158192..159394 (+)	1203	WP_139544813.1	copper-sensing histidine kinase CrdS	-
D4K20_RS00735	-	159397..160791 (+)	1395	WP_139544815.1	NAD(P)H-hydrate dehydratase	-
D4K20_RS00740	-	160802..162268 (+)	1467	WP_078242334.1	replicative DNA helicase	-
D4K20_RS00745	comEC/comE3	162265..163578 (+)	1314	WP_201737774.1	ComEC/Rec2 family competence protein	Machinery gene
D4K20_RS00750	mqnP	163649..164491 (+)	843	WP_236634937.1	menaquinone biosynthesis prenyltransferase MqnP	-
D4K20_RS00755	-	164484..164978 (+)	495	WP_001879769.1	hypothetical protein	-
D4K20_RS00760	-	164991..165497 (+)	507	WP_000953098.1	hypothetical protein	-
D4K20_RS00765	-	165491..166294 (+)	804	WP_139544821.1	phosphatidylserine decarboxylase	-
D4K20_RS00770	nadA	166284..167294 (+)	1011	WP_139544822.1	quinolinate synthase NadA	-
D4K20_RS00775	nadC	167294..168115 (+)	822	WP_139544824.1	carboxylating nicotinate-nucleotide diphosphorylase	-

Sequence

Protein

• Length: 437 a.a.
• Molecular weight: 50262.17 Da
• Isoelectric Point: 9.9348

>NTDB_id=320139 D4K20_RS00745 WP_201737774.1 162265..163578(+) (comEC/comE3) [Helicobacter pylori strain 173-A-EK1]
MKDKTFQGAFELLTTLKEYLWCGVILSLLLAINLYLEYLNHQKLDFSKPTSLNAQILLQYPKTKDQKTYFVLKLQSKNMI
FYTTIKEPLKNLQYRHAQFFGRIKSCSFLESLKSCFFQTYSFSLTRKQDFKSHWRHFIDSVHSSALVGNLYRALFIGDSL
NKDLRDRANALGINHLLAISGFHLGILSVSVYFLFSLFYTPLQKRYFPYRNAFYDIGVLVWVFLLGYLLLLDFLPSFFRA
FLMGLLGFLACFFGVRLLSFKLLILACCIAIALLPKLLFSVGFLLSVCGVWYIFLFLKHTQAFFKTSSFLARSFQAISLS
VLVFLNMLIVAHAFFPMFSPYQLFSIPLGLIFIVFFPLSLFLHAVGLGSLLDRILSMPLTIPTISISSPLWLLGAHLFLT
ILSARFFKVYLSMNVLSAGFFLYCCYQYIIMPSLIVG

Nucleotide

• Length: 1314 bp

>NTDB_id=320139 D4K20_RS00745 WP_201737774.1 162265..163578(+) (comEC/comE3) [Helicobacter pylori strain 173-A-EK1]
TTGAAAGATAAAACTTTTCAGGGGGCGTTTGAACTTCTTACGACCCTCAAAGAATACTTATGGTGTGGGGTTATTTTAAG
CCTTTTGTTGGCAATCAATCTTTATTTAGAATACTTGAATCACCAAAAGCTTGATTTCTCAAAACCTACAAGCTTGAACG
CTCAAATCCTATTACAATACCCCAAAACTAAAGATCAAAAAACCTATTTTGTTTTAAAGCTCCAATCAAAAAACATGATC
TTTTACACCACCATTAAAGAGCCTTTAAAAAACCTCCAATACCGCCATGCGCAATTTTTTGGCAGGATCAAATCTTGCTC
GTTTTTGGAGTCTCTAAAATCATGCTTTTTTCAAACTTATTCTTTTTCTTTAACACGAAAACAAGATTTCAAATCGCATT
GGCGCCATTTTATTGACAGCGTTCATTCAAGCGCTTTAGTGGGCAATTTGTATCGCGCGTTATTTATAGGGGATAGCTTG
AATAAGGATTTAAGAGACAGGGCTAACGCGCTAGGGATCAACCACTTACTAGCCATTAGCGGGTTCCATTTAGGGATTTT
GAGCGTTAGCGTGTATTTTCTTTTCTCTCTTTTTTATACCCCCTTACAAAAACGCTATTTCCCTTACAGGAACGCTTTTT
ATGATATAGGGGTTTTGGTGTGGGTTTTTTTGCTAGGGTATTTGTTGTTATTGGATTTTTTACCCTCTTTTTTCAGGGCG
TTTTTAATGGGCTTATTAGGGTTTTTGGCATGCTTTTTTGGGGTAAGGCTTTTGAGTTTTAAACTTTTGATTTTAGCGTG
CTGTATCGCCATAGCGTTACTCCCTAAATTGCTTTTTAGCGTGGGGTTTTTGCTTTCTGTTTGTGGGGTGTGGTATATCT
TTTTGTTTTTAAAACACACTCAAGCCTTTTTTAAAACCTCTTCTTTTTTGGCGCGATCTTTTCAAGCCATAAGCTTAAGC
GTGTTAGTGTTTTTGAACATGCTCATTGTTGCGCATGCCTTTTTCCCTATGTTTTCGCCCTACCAGCTCTTTAGCATTCC
TTTAGGCTTGATTTTTATCGTGTTTTTCCCTTTGAGTTTGTTTCTGCATGCTGTGGGTTTGGGGTCTTTGTTGGATCGTA
TTTTAAGCATGCCTTTAACAATCCCTACGATTTCAATCTCTTCGCCTTTATGGCTTTTAGGGGCGCATTTGTTTTTAACG
ATTTTAAGCGCGCGTTTTTTTAAAGTTTATTTAAGCATGAATGTTTTAAGCGCGGGCTTTTTCTTGTATTGTTGCTATCA
ATATATTATAATGCCTAGCTTAATTGTAGGTTAG

Domains

Predicted by InterproScan.

• Competence protein (Competence) (159-391)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC/comE3	Helicobacter pylori 26695	95.423	100	0.954