Detailed information NTG0320103

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: D4K63_RS05820
• Genome accession: NZ_CP032901
• Coordinates: 1174628..1175428 (-)
• Length: 266 a.a.
• NCBI ID: WP_139532495.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain 381-A-EK4
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1169628..1180428

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D4K63_RS05770	-	1169929..1170264 (-)	336	WP_001862999.1	hypothetical protein	-
D4K63_RS05775	-	1170254..1171039 (-)	786	WP_139532488.1	hypothetical protein	-
D4K63_RS05780	-	1171039..1171420 (-)	382	Protein_1110	DUF1294 domain-containing protein	-
D4K63_RS05790	-	1171717..1171983 (-)	267	WP_001883605.1	hypothetical protein	-
D4K63_RS05795	-	1171971..1172345 (-)	375	WP_001882828.1	lysozyme	-
D4K63_RS05800	-	1172402..1172962 (-)	561	WP_139532490.1	hypothetical protein	-
D4K63_RS05805	-	1172946..1173284 (-)	339	WP_139532492.1	hypothetical protein	-
D4K63_RS05810	-	1173411..1173992 (-)	582	WP_120906710.1	tetratricopeptide repeat protein	-
D4K63_RS05815	dprB	1174227..1174631 (-)	405	WP_139532493.1	Holliday junction resolvase RuvX	Machinery gene
D4K63_RS05820	dprA	1174628..1175428 (-)	801	WP_139532495.1	DNA-processing protein DprA	Machinery gene
D4K63_RS05825	minE	1175435..1175668 (-)	234	WP_139532497.1	cell division topological specificity factor MinE	-
D4K63_RS05830	minD	1175665..1176471 (-)	807	WP_139532499.1	septum site-determining protein MinD	-
D4K63_RS05835	ilvC	1176495..1177487 (-)	993	WP_139532501.1	ketol-acid reductoisomerase	-
D4K63_RS05845	-	1177736..1178518 (+)	783	WP_139532502.1	NAD+ synthase	-
D4K63_RS05850	-	1178515..1179453 (+)	939	WP_139532504.1	tetraacyldisaccharide 4'-kinase	-
D4K63_RS05855	pseH	1179386..1179928 (-)	543	WP_139532506.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29787.69 Da
• Isoelectric Point: 8.5819

>NTDB_id=320103 D4K63_RS05820 WP_139532495.1 1174628..1175428(-) (dprA) [Helicobacter pylori strain 381-A-EK4]
MKSNFQYSTLENIPKAFGILKDPPKKLYCVGDTKLLEAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPTTIMLSPCSLDFIYPTNNHKVIQEIAQNGLILSEYEKDFMPIKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDYHLKEMPEMKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=320103 D4K63_RS05820 WP_139532495.1 1174628..1175428(-) (dprA) [Helicobacter pylori strain 381-A-EK4]
ATGAAAAGTAATTTCCAATACAGCACGCTAGAAAATATCCCTAAAGCCTTTGGCATTCTCAAAGACCCCCCTAAAAAGCT
CTATTGTGTGGGCGATACCAAGCTTTTAGAAGCGCCTTTAAAAGTGGCTATTATAGGCACAAGAAGACCCACCCCTTACA
GCAAGCAACACACGATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGTGGGGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAACAACGATCATGCTTTCGCCTTGCAGTTTGGATTTCATTTATCCTACGAA
CAACCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTCATGCCCATTAAAG
GCTCTTTTTTAGCCAGAAACCGCCTGGTGATCGCTTTAAGCGATGCGGTGATTATCCCCCAAGCGGATTTAAAAAGCGGC
TCTATGAGCAGCGCGAGATTAGCCCAAAAATACCAAAAACCCTTATTTGTTTTACCCCAGCGCTTGAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACT
ACCATTTAAAAGAAATGCCTGAAATGAAAGATGAATTTTTAGAATATTGTGCGAAAAACCCTAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGATAAGCTTTTAGAATACGAGCTGTTGGGTAAGATCAAGCGCATCAATCATATCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	97.368	100	0.974
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.673	84.962	0.414