Detailed information NTG0320076

Bioinformatically predicted

Overview

• Name: comEC/comE3
• Type: Machinery gene
• Locus tag: D4K94_RS00885
• Genome accession: NZ_CP032900
• Coordinates: 184739..186052 (+)
• Length: 437 a.a.
• NCBI ID: WP_201737477.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain 476-A-EK5
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 179739..191052

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D4K94_RS00865	crdR	180065..180706 (+)	642	WP_108341526.1	copper response regulator transcription factor CrdR	-
D4K94_RS00870	crdS	180687..181874 (+)	1188	WP_139546271.1	copper-sensing histidine kinase CrdS	-
D4K94_RS00875	-	181877..183271 (+)	1395	WP_139546272.1	NAD(P)H-hydrate dehydratase	-
D4K94_RS00880	-	183282..184742 (+)	1461	WP_000349728.1	replicative DNA helicase	-
D4K94_RS00885	comEC/comE3	184739..186052 (+)	1314	WP_201737477.1	ComEC/Rec2 family competence protein	Machinery gene
D4K94_RS00890	mqnP	186079..186963 (+)	885	WP_139541644.1	menaquinone biosynthesis prenyltransferase MqnP	-
D4K94_RS00895	-	186956..187450 (+)	495	WP_187648986.1	hypothetical protein	-
D4K94_RS00900	-	187463..187969 (+)	507	WP_000958158.1	hypothetical protein	-
D4K94_RS00905	-	187963..188766 (+)	804	WP_139541645.1	phosphatidylserine decarboxylase	-
D4K94_RS00910	nadA	188756..189766 (+)	1011	WP_139546273.1	quinolinate synthase NadA	-
D4K94_RS00915	nadC	189766..190587 (+)	822	WP_139546274.1	carboxylating nicotinate-nucleotide diphosphorylase	-

Sequence

Protein

• Length: 437 a.a.
• Molecular weight: 50261.19 Da
• Isoelectric Point: 9.7790

>NTDB_id=320076 D4K94_RS00885 WP_201737477.1 184739..186052(+) (comEC/comE3) [Helicobacter pylori strain 476-A-EK5]
MKDKTFQGAFELLSTPKEYLWCGVFLSLLLAINLYLEYLNYQKLDFSKPTSLNAQILLQYPKTKDQKTYFVLKLQSKGMI
FYTTIKEPLKNLQYRHAQFFGRIKPCSFLESLKSCFFQTYSFSLTRKQDFKSHWRYFIDSAHSSALVGNLYRALFIGDSL
NKDLRDRANALGINHLLAISGFHLGILSASVYFLFSLFYTPLQKRYFPYRNAFYDIGVLVWVFLLGYLLLLDFLPSFFRA
FLMGLLGFLACFFGARLLSFKLLILACCIAIALLPKLLFSVGFLLSVCGVWYIFLFLKHTEIFFKTSSFLMRSIQAISLS
ALVFLNMLIIAHAFFPMFSPYQLFSIPLGLIFIVFFPLSLFLHAVGLGSLLDHILSMPLTIPTISVPSPLWLLGVHLFLT
ILSARFFKVYLSMNILSAGFFLYCCYQYIIMPSLIVG

Nucleotide

• Length: 1314 bp

>NTDB_id=320076 D4K94_RS00885 WP_201737477.1 184739..186052(+) (comEC/comE3) [Helicobacter pylori strain 476-A-EK5]
TTGAAAGATAAAACTTTTCAGGGGGCGTTTGAACTTCTTTCAACCCCCAAAGAATACTTATGGTGTGGGGTGTTTTTAAG
CCTTTTGTTGGCAATCAATCTTTATTTAGAATACTTGAATTACCAAAAGCTTGATTTTTCAAAACCGACAAGCTTGAACG
CTCAAATCTTGTTGCAATACCCTAAAACTAAAGATCAAAAAACCTATTTTGTCTTAAAGCTCCAATCAAAGGGCATGATC
TTTTATACCACTATTAAAGAGCCTTTAAAAAACCTCCAATACCGCCATGCGCAATTTTTTGGCAGGATCAAACCCTGCTC
GTTCTTAGAGTCTTTAAAATCATGCTTTTTTCAAACTTATTCTTTTTCTTTAACGCGAAAACAAGATTTCAAATCGCATT
GGCGCTATTTCATTGACAGCGCTCATTCAAGCGCTTTAGTGGGTAATTTGTATCGCGCGTTATTTATAGGGGATAGCTTG
AATAAAGATTTAAGAGACAGGGCTAACGCGCTAGGGATCAACCACTTACTAGCCATTAGCGGATTCCATTTAGGGATTTT
GAGCGCGAGCGTGTATTTTCTTTTCTCTCTTTTTTATACCCCCTTACAAAAACGCTATTTCCCTTATAGGAACGCTTTTT
ATGATATAGGGGTTTTGGTGTGGGTTTTTTTGCTAGGGTATTTATTGCTATTGGATTTTTTACCCTCTTTTTTCAGGGCG
TTTTTAATGGGCTTGTTAGGGTTTTTGGCATGCTTTTTTGGGGCAAGGCTTTTGAGTTTTAAACTTTTGATTTTAGCGTG
CTGTATCGCCATAGCGTTACTCCCTAAATTGCTTTTTAGCGTGGGGTTTTTGCTTTCTGTTTGTGGGGTGTGGTATATCT
TTTTGTTTTTAAAACACACGGAAATTTTTTTTAAAACCTCTTCTTTTTTGATGCGATCTATTCAAGCCATAAGCTTAAGT
GCGTTAGTGTTTTTGAACATGCTCATTATCGCGCATGCCTTTTTCCCTATGTTTTCGCCCTACCAGCTCTTTAGCATTCC
TTTAGGCTTGATTTTTATCGTGTTTTTCCCTTTGAGTTTGTTCTTGCATGCGGTGGGTTTAGGGTCTTTGTTGGATCATA
TTTTAAGCATGCCTTTAACAATCCCTACGATTTCGGTTCCTTCACCCTTATGGCTTTTAGGGGTGCATTTGTTTTTAACG
ATTTTAAGTGCGCGTTTTTTTAAAGTTTATTTAAGCATGAATATTTTGAGCGCGGGCTTTTTCTTGTATTGTTGCTATCA
ATATATTATAATGCCTAGCTTAATTGTAGGTTAG

Domains

Predicted by InterproScan.

• Competence protein (Competence) (159-385)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC/comE3	Helicobacter pylori 26695	96.11	100	0.961