Detailed information NTG0320071

Bioinformatically predicted

Overview

• Name: comEC/comE3
• Type: Machinery gene
• Locus tag: D4L20_RS07615
• Genome accession: NZ_CP032899
• Coordinates: 1548773..1550086 (-)
• Length: 437 a.a.
• NCBI ID: WP_180339055.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain 478-A-EK1
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1543773..1555086

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D4L20_RS07585	nadC	1544244..1545065 (-)	822	WP_139550033.1	carboxylating nicotinate-nucleotide diphosphorylase	-
D4L20_RS07590	nadA	1545065..1546069 (-)	1005	WP_139550034.1	quinolinate synthase NadA	-
D4L20_RS07595	-	1546059..1546862 (-)	804	WP_139550035.1	phosphatidylserine decarboxylase	-
D4L20_RS07600	-	1546856..1547362 (-)	507	WP_000953120.1	DUF6115 domain-containing protein	-
D4L20_RS07605	-	1547375..1547869 (-)	495	WP_015643723.1	hypothetical protein	-
D4L20_RS07610	mqnP	1547862..1548746 (-)	885	WP_139550036.1	menaquinone biosynthesis prenyltransferase MqnP	-
D4L20_RS07615	comEC/comE3	1548773..1550086 (-)	1314	WP_180339055.1	ComEC/Rec2 family competence protein	Machinery gene
D4L20_RS07620	-	1550083..1551549 (-)	1467	WP_120806117.1	replicative DNA helicase	-
D4L20_RS07625	-	1551560..1552960 (-)	1401	WP_139550037.1	NAD(P)H-hydrate dehydratase	-
D4L20_RS07630	crdS	1552963..1554165 (-)	1203	WP_139550038.1	copper-sensing histidine kinase CrdS	-
D4L20_RS07635	crdR	1554131..1554772 (-)	642	WP_139550039.1	copper response regulator transcription factor CrdR	-

Sequence

Protein

• Length: 437 a.a.
• Molecular weight: 50075.00 Da
• Isoelectric Point: 9.7962

>NTDB_id=320071 D4L20_RS07615 WP_180339055.1 1548773..1550086(-) (comEC/comE3) [Helicobacter pylori strain 478-A-EK1]
MKDKTFHGAFELLTTPKEYLWCGVFLSLLLAINLCLEYLNYQKLDFSKPTSLSAQILLQYPKTKDQKTYFVLKLQSKNMI
FYTTIKEPLKNLQYRYAQFFGKIKPCSFLESLKSCFFQTYSFSLTRKQDFKSHARHFIDSAHSSALVGNLYRALFIGDSL
NKDLRDRANALGINHLLAISGFHLGILSASVYFLFSLFYTPLQKRYFPYRNAFYDIGVLVWVFLLGYLLLLDFLPSFFRA
FLMGLLGFLACFFGVRLLSFKLLILACCIAIALLPKLLFSVGFLLSVCGVWYIFLFLKHTQAFFKTSSFLARSFQAIALS
VLMFLNMLIIAHAFFPMFSPYQLFSIPLGLIFIVFFPLSLFLHAVGLGSLLDPILNMPLTIPTISIPSPLWLLGAHLFLT
ILSVRFFKVYLSMNVLSAGFFLYCCYQYIIMPSSIVG

Nucleotide

• Length: 1314 bp

>NTDB_id=320071 D4L20_RS07615 WP_180339055.1 1548773..1550086(-) (comEC/comE3) [Helicobacter pylori strain 478-A-EK1]
TTGAAAGATAAAACTTTTCATGGGGCGTTTGAACTTCTTACAACCCCCAAAGAATACTTGTGGTGTGGGGTGTTTTTAAG
CCTTTTGTTGGCAATCAACCTTTGTTTAGAATACTTGAATTACCAAAAGCTTGATTTTTCAAAACCTACAAGCTTGAGTG
CTCAAATCTTGTTACAATACCCTAAAACGAAAGATCAAAAAACCTATTTTGTTTTAAAACTCCAATCAAAAAACATGATC
TTTTACACCACCATTAAAGAGCCTTTAAAAAACCTCCAATACCGCTATGCGCAATTTTTTGGCAAAATCAAACCCTGCTC
GTTCTTAGAGTCTCTAAAATCATGCTTTTTTCAAACCTATTCTTTTTCTTTAACGCGAAAACAAGATTTCAAATCGCATG
CGCGCCATTTCATTGACAGCGCTCATTCAAGCGCTTTAGTGGGTAATTTGTATCGCGCGTTATTTATAGGGGATAGCTTG
AATAAAGACTTAAGAGACAGGGCTAATGCGCTAGGGATCAACCACTTACTAGCCATTAGTGGGTTCCATTTAGGGATTTT
GAGCGCGAGCGTGTATTTTCTTTTCTCTCTTTTTTATACCCCCTTACAAAAACGCTATTTCCCTTACAGGAACGCTTTTT
ATGATATAGGGGTTTTGGTGTGGGTTTTTTTGCTGGGGTATTTGTTGCTATTGGATTTTTTACCCTCTTTTTTCAGGGCG
TTTTTAATGGGCTTATTAGGGTTTTTGGCATGCTTTTTTGGGGTAAGGCTTTTGAGTTTTAAACTTTTGATTTTAGCGTG
CTGTATCGCCATAGCGTTACTCCCTAAATTGCTTTTTAGCGTGGGGTTTTTGCTTTCTGTGTGTGGGGTGTGGTATATCT
TTTTATTTTTAAAACACACTCAAGCTTTTTTTAAAACCTCTTCTTTTTTGGCGCGATCTTTTCAAGCGATCGCTTTAAGC
GTGTTAATGTTTTTGAATATGCTCATCATTGCGCATGCCTTTTTCCCTATGTTTTCGCCCTACCAGCTCTTTAGCATTCC
TTTAGGCTTGATTTTTATCGTGTTTTTCCCTTTGAGTTTGTTCTTACATGCGGTGGGTTTGGGGTCTTTGTTAGATCCCA
TTTTAAACATGCCTTTAACAATCCCTACAATTTCAATCCCTTCGCCTTTATGGCTTTTAGGGGCGCATTTGTTTTTAACG
ATTTTAAGCGTGCGTTTTTTTAAAGTTTATTTAAGCATGAATGTTTTAAGTGCGGGCTTTTTCTTGTATTGTTGCTATCA
ATATATTATAATGCCTAGTTCAATTGTAGGTTAG

Domains

Predicted by InterproScan.

• Competence protein (Competence) (159-378)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC/comE3	Helicobacter pylori 26695	94.966	100	0.95