Detailed information NTG0320033

Bioinformatically predicted

Overview

• Name: comEC/comE3
• Type: Machinery gene
• Locus tag: D4L56_RS00770
• Genome accession: NZ_CP032898
• Coordinates: 165873..167186 (+)
• Length: 437 a.a.
• NCBI ID: WP_180339213.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain 479-C-EK2
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 160873..172186

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D4L56_RS00750	crdR	161187..161828 (+)	642	WP_139518062.1	copper response regulator transcription factor CrdR	-
D4L56_RS00755	crdS	161794..162996 (+)	1203	WP_139518063.1	copper-sensing histidine kinase CrdS	-
D4L56_RS00760	-	162999..164399 (+)	1401	WP_139518064.1	NAD(P)H-hydrate dehydratase	-
D4L56_RS00765	-	164410..165876 (+)	1467	WP_000349729.1	replicative DNA helicase	-
D4L56_RS00770	comEC/comE3	165873..167186 (+)	1314	WP_180339213.1	ComEC/Rec2 family competence protein	Machinery gene
D4L56_RS00775	mqnP	167215..168099 (+)	885	WP_139523617.1	menaquinone biosynthesis prenyltransferase MqnP	-
D4L56_RS00780	-	168092..168586 (+)	495	WP_180339214.1	hypothetical protein	-
D4L56_RS00785	-	168599..169105 (+)	507	WP_139523618.1	DUF6115 domain-containing protein	-
D4L56_RS00790	-	169099..169902 (+)	804	WP_139518067.1	phosphatidylserine decarboxylase	-
D4L56_RS00795	nadA	169892..170902 (+)	1011	WP_139518068.1	quinolinate synthase NadA	-
D4L56_RS00800	nadC	170902..171723 (+)	822	WP_139518069.1	carboxylating nicotinate-nucleotide diphosphorylase	-

Sequence

Protein

• Length: 437 a.a.
• Molecular weight: 50188.13 Da
• Isoelectric Point: 9.9348

>NTDB_id=320033 D4L56_RS00770 WP_180339213.1 165873..167186(+) (comEC/comE3) [Helicobacter pylori strain 479-C-EK2]
MKDKTFQGAFELLTTPKEYLVCGVFLSLLLAINLYLEYLNHQKLDFSKPTSLNAQILLQYPKTKDQKTYFVLKLQSKGMI
FYTTIKEPLKNLQYRHAQFFGRIKSCSFLESLKSCFFQTYSFSLTRKQDFKSHWRHFIDSAHSSALVGNLYRALFIGDSL
NKDLRDRANALGINHLLAISGFHLGILSVSVYFLFSLFYTPLQKRYFPYRNAFYDIGVLVWVFLLGYLLLLDFLPSFFRA
FLMGLLGFLACFFGVRILSFKLLILACCIAIALLPKLLFSVGFLLSVCGVWYIFLFLKHTQIFFKTSSFLARSFQTISLS
TLVFLNMLIIAHAFFPMFSPYQLFSIPLGLIFIVFFPLSLFLHAVGLGALLDRLLSMPLTIPTISIPSPLWLLGAHLFLT
ILSVRFFKVYLSMNVLGAGFFLYCCYQYIIMPSLIVG

Nucleotide

• Length: 1314 bp

>NTDB_id=320033 D4L56_RS00770 WP_180339213.1 165873..167186(+) (comEC/comE3) [Helicobacter pylori strain 479-C-EK2]
TTGAAAGATAAAACTTTTCAGGGGGCGTTTGAACTTCTTACGACCCCCAAAGAATACCTAGTGTGTGGGGTGTTTTTAAG
CCTTTTGTTGGCAATCAATCTTTATTTAGAATACTTGAATCACCAAAAGCTTGATTTTTCAAAACCTACAAGCTTGAACG
CTCAAATCTTGTTGCAATACCCCAAAACTAAAGATCAAAAAACCTATTTTGTTTTAAAGCTCCAATCAAAGGGCATGATC
TTTTACACCACCATTAAAGAGCCTTTAAAAAACCTCCAATACCGCCACGCGCAATTTTTTGGCAGGATCAAATCTTGCTC
GTTCTTAGAGTCTCTAAAATCATGCTTTTTTCAAACTTATTCTTTTTCTTTAACGCGAAAACAAGATTTTAAATCGCATT
GGCGCCATTTCATTGACAGCGCTCATTCAAGCGCTTTAGTGGGTAATTTGTATCGCGCGTTATTTATAGGGGATAGCTTG
AATAAAGATTTAAGAGACAGGGCTAACGCGCTAGGGATCAACCACTTACTAGCCATTAGCGGGTTCCATTTAGGGATTTT
GAGCGTTAGCGTGTATTTTCTTTTTTCGCTTTTTTATACCCCCTTACAAAAACGCTATTTCCCTTACAGGAACGCTTTTT
ATGATATAGGGGTTTTGGTGTGGGTTTTTTTGCTAGGGTATTTATTACTATTAGATTTTTTACCCTCTTTTTTCAGGGCG
TTTTTAATGGGCTTATTAGGGTTTTTGGCATGCTTTTTTGGGGTAAGGATTTTGAGTTTTAAACTTTTGATTTTAGCGTG
CTGTATCGCCATAGCGTTACTCCCTAAATTGCTTTTTAGCGTGGGGTTTTTGCTTTCTGTTTGTGGGGTGTGGTATATCT
TTTTGTTTTTAAAACACACTCAAATTTTTTTTAAAACCTCTTCTTTTTTGGCGCGATCTTTTCAAACCATAAGCTTAAGC
ACGCTAGTATTTTTGAACATGCTCATCATTGCGCATGCCTTTTTCCCTATGTTTTCGCCCTACCAGCTCTTTAGCATTCC
TTTAGGCTTGATTTTTATCGTGTTTTTCCCTTTGAGTTTGTTCTTGCATGCGGTGGGTTTGGGGGCTTTGTTGGATCGCC
TTTTAAGCATGCCTTTAACAATCCCTACGATTTCAATCCCTTCGCCTTTATGGCTTTTAGGGGCGCATTTATTTTTAACG
ATTTTAAGCGTGCGTTTTTTTAAAGTTTATTTGAGCATGAATGTTTTAGGCGCGGGCTTTTTCTTGTATTGTTGCTATCA
ATATATTATAATGCCTAGCTTAATTGTAGGTTAG

Domains

Predicted by InterproScan.

• Competence protein (Competence) (159-373)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC/comE3	Helicobacter pylori 26695	95.881	100	0.959