Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   D9T11_RS13970 Genome accession   NZ_CP032897
Coordinates   2613222..2613848 (+) Length   208 a.a.
NCBI ID   WP_032637053.1    Uniprot ID   A0AAJ6MNH4
Organism   Enterobacter kobei strain WCHEK045523     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 2608222..2618848
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D9T11_RS13950 (D9T11_13950) - 2608620..2610380 (-) 1761 WP_121527702.1 Lon protease family protein -
  D9T11_RS13955 (D9T11_13955) matP 2610567..2611019 (+) 453 WP_023332611.1 macrodomain Ter protein MatP -
  D9T11_RS13960 (D9T11_13960) ompA 2611084..2612139 (-) 1056 WP_014883252.1 porin OmpA -
  D9T11_RS13965 (D9T11_13965) sulA 2612495..2613004 (-) 510 WP_014883253.1 SOS-induced cell division inhibitor SulA -
  D9T11_RS13970 (D9T11_13970) sxy/tfoX 2613222..2613848 (+) 627 WP_032637053.1 TfoX/Sxy family DNA transformation protein Regulator
  D9T11_RS13975 (D9T11_13975) yccS 2613805..2615967 (-) 2163 WP_121527703.1 YccS family putative transporter -
  D9T11_RS13980 (D9T11_13980) - 2615987..2616433 (-) 447 WP_023332615.1 YccF domain-containing protein -
  D9T11_RS13985 (D9T11_13985) helD 2616557..2618611 (+) 2055 WP_063861070.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23930.53 Da        Isoelectric Point: 9.0691

>NTDB_id=320018 D9T11_RS13970 WP_032637053.1 2613222..2613848(+) (sxy/tfoX) [Enterobacter kobei strain WCHEK045523]
MKKISYERIYQSQEYLSPLGEIHHRALFGGYTLAIDDAVFAMVSDGELYLRACEESAKYCVKNAASFLTLMKRGRPVLLN
YYRVDDGLWQDRERLLQLSSFALNAARKERCQRHQRNRLKDLPNLTFQLEVLLFEAGITNEETLRALGARECWLKMRAKN
RALGIKVLFALEGAIEGLHEAALPAGTRRELTEWFNALPEPQKNHSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=320018 D9T11_RS13970 WP_032637053.1 2613222..2613848(+) (sxy/tfoX) [Enterobacter kobei strain WCHEK045523]
ATGAAAAAGATATCTTATGAACGGATTTATCAATCCCAGGAATACCTCTCACCGCTAGGAGAAATTCATCATCGCGCACT
GTTCGGTGGCTATACCCTGGCGATAGATGACGCGGTTTTTGCCATGGTGTCAGATGGCGAGCTGTACCTTCGCGCCTGTG
AAGAAAGCGCGAAATACTGTGTAAAAAATGCCGCCTCTTTTTTGACGCTGATGAAACGAGGCCGCCCGGTACTTCTCAAC
TATTACCGTGTCGATGATGGACTGTGGCAAGACAGGGAACGGCTGCTTCAGCTCTCCTCTTTCGCGCTCAATGCGGCGAG
GAAAGAGCGCTGTCAGCGCCATCAACGAAACCGGCTTAAAGATCTGCCAAACCTGACCTTTCAGCTTGAGGTATTACTTT
TTGAAGCTGGCATTACTAACGAAGAGACGCTGCGGGCACTGGGTGCCAGGGAGTGCTGGTTAAAGATGCGGGCTAAAAAT
AGGGCACTCGGTATTAAAGTGCTCTTCGCCCTTGAGGGGGCTATTGAGGGTTTGCATGAGGCGGCACTCCCGGCAGGCAC
TCGCCGGGAGTTGACGGAGTGGTTTAATGCGCTGCCTGAGCCACAGAAGAATCACTCCTCCAGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

57.143

97.596

0.558

Multiple sequence alignment