Detailed information NTG0319926

Bioinformatically predicted

Overview

• Name: abrB
• Type: Regulator
• Locus tag: D9C08_RS11835
• Genome accession: NZ_CP032872
• Coordinates: 2243785..2244063 (+)
• Length: 92 a.a.
• NCBI ID: WP_003244728.1
• Uniprot ID: A0A199WGU6
• Organism: Bacillus subtilis subsp. subtilis strain 2KL1
• Function: repression of comK; repression of rok (predicted from homology) Competence regulation

Genomic Context

Location: 2238785..2249063

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D9C08_RS11815 (D9C08_11815)	-	2239435..2240787 (-)	1353	WP_014478984.1	IS1182 family transposase	-
D9C08_RS11820 (D9C08_11820)	ampS	2240917..2242149 (-)	1233	WP_003232341.1	aminopeptidase	-
D9C08_RS11825 (D9C08_11825)	ykpC	2242259..2242393 (-)	135	WP_003238865.1	protein YkpC	-
D9C08_RS11830 (D9C08_11830)	mreBH	2242494..2243501 (-)	1008	WP_026113694.1	cell shape-determining protein MreBH	-
D9C08_RS11835 (D9C08_11835)	abrB	2243785..2244063 (+)	279	WP_003244728.1	transcriptional regulator AbhA	Regulator
D9C08_RS11845 (D9C08_11845)	-	2244469..2245593 (+)	1125	WP_014478926.1	IS4-like element IS4Bsu1 family transposase	-
D9C08_RS11850 (D9C08_11850)	kinC	2245740..2246954 (+)	1215	Protein_2259	two-component sensor histidine kinase KinC	-
D9C08_RS11855 (D9C08_11855)	ykqA	2246970..2247803 (+)	834	WP_014479687.1	gamma-glutamylcyclotransferase	-
D9C08_RS11860 (D9C08_11860)	ktrC	2247866..2248531 (+)	666	WP_003222311.1	Ktr system potassium transporter KtrC	-

Sequence

Protein

• Length: 92 a.a.
• Molecular weight: 10256.07 Da
• Isoelectric Point: 5.8808

>NTDB_id=319926 D9C08_RS11835 WP_003244728.1 2243785..2244063(+) (abrB) [Bacillus subtilis subsp. subtilis strain 2KL1]
MKSIGVVRKVDELGRIVMPIELRRALDIAIKDSIEFFVDGDKIILKKYKPHGVCLMTGEITSENKEYGNGKITLSPEGAQ
LLLEEIQAALKE

Nucleotide

• Length: 279 bp

>NTDB_id=319926 D9C08_RS11835 WP_003244728.1 2243785..2244063(+) (abrB) [Bacillus subtilis subsp. subtilis strain 2KL1]
ATGAAATCAATAGGTGTTGTGAGAAAAGTAGATGAATTAGGCCGCATTGTCATGCCGATTGAGTTGAGACGGGCATTGGA
TATTGCCATAAAAGACAGCATTGAGTTTTTTGTTGACGGAGATAAAATTATCTTGAAAAAGTACAAACCTCATGGCGTTT
GTTTAATGACTGGAGAAATCACTTCAGAAAATAAAGAATACGGCAACGGTAAAATTACGCTAAGCCCTGAGGGTGCACAG
CTGCTTCTCGAAGAAATTCAAGCCGCTTTAAAAGAATAA

Domains

Predicted by InterproScan.

• AbrB C-terminal domain (AbrB_C) (53-88)

• Antidote-toxin recognition MazE, bacterial antitoxin (MazE_antitoxin) (8-51)

3D structure

• AlphaFold DB: A0A199WGU6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
abrB	Bacillus subtilis subsp. subtilis str. 168	58.242	98.913	0.576