Detailed information NTG0319915

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: D9C08_RS09990
• Genome accession: NZ_CP032872
• Coordinates: 1911821..1912774 (+)
• Length: 317 a.a.
• NCBI ID: WP_069837427.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. subtilis strain 2KL1
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1906821..1917774

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D9C08_RS09960 (D9C08_09960)	argF	1907362..1908321 (+)	960	WP_014479432.1	ornithine carbamoyltransferase	-
D9C08_RS09970 (D9C08_09970)	yjzC	1909697..1909876 (+)	180	WP_003245356.1	YjzC family protein	-
D9C08_RS09975 (D9C08_09975)	yjzD	1909923..1910108 (-)	186	WP_003245236.1	DUF2929 domain-containing protein	-
D9C08_RS09980 (D9C08_09980)	-	1910357..1911091 (+)	735	WP_014479433.1	hypothetical protein	-
D9C08_RS09985 (D9C08_09985)	-	1911173..1911730 (+)	558	WP_014479435.1	hypothetical protein	-
D9C08_RS09990 (D9C08_09990)	med	1911821..1912774 (+)	954	WP_069837427.1	transcriptional regulator Med	Regulator
D9C08_RS09995 (D9C08_09995)	comZ	1912789..1912980 (+)	192	WP_046380930.1	ComG operon transcriptional repressor ComZ	Regulator
D9C08_RS10000 (D9C08_10000)	yjzB	1913010..1913249 (-)	240	WP_003232972.1	spore coat protein YjzB	-
D9C08_RS10005 (D9C08_10005)	fabH	1913414..1914352 (+)	939	WP_003232971.1	beta-ketoacyl-ACP synthase III	-
D9C08_RS10010 (D9C08_10010)	fabF	1914375..1915616 (+)	1242	WP_003244890.1	beta-ketoacyl-ACP synthase II	-
D9C08_RS10015 (D9C08_10015)	yjaZ	1915692..1916477 (+)	786	WP_003232967.1	DUF2268 domain-containing protein	-
D9C08_RS10020 (D9C08_10020)	appD	1916668..1917654 (+)	987	WP_003232965.1	oligopeptide ABC transporter ATP-binding protein AppD	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35310.84 Da
• Isoelectric Point: 4.6031

>NTDB_id=319915 D9C08_RS09990 WP_069837427.1 1911821..1912774(+) (med) [Bacillus subtilis subsp. subtilis strain 2KL1]
MITRLVMIFSVLLLLSGCGKTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDQDFQQRIAKLIKTYNKTGELPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=319915 D9C08_RS09990 WP_069837427.1 1911821..1912774(+) (med) [Bacillus subtilis subsp. subtilis strain 2KL1]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGAAAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACGAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTGGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGTTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAACACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGATC
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	99.685	100	0.997