Detailed information NTG0319838

Bioinformatically predicted

Overview

• Name: abrB
• Type: Regulator
• Locus tag: D9C20_RS17970
• Genome accession: NZ_CP032867
• Coordinates: 3371138..3371416 (+)
• Length: 92 a.a.
• NCBI ID: WP_003244728.1
• Uniprot ID: A0A199WGU6
• Organism: Bacillus subtilis subsp. subtilis strain N4-2
• Function: repression of comK; repression of rok (predicted from homology) Competence regulation

Genomic Context

Location: 3366138..3376416

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D9C20_RS17950 (D9C20_17950)	panEB	3367326..3368237 (+)	912	WP_014479685.1	ketopantoate reductase family protein	-
D9C20_RS17955 (D9C20_17955)	ampS	3368271..3369503 (-)	1233	WP_003232341.1	aminopeptidase	-
D9C20_RS17960 (D9C20_17960)	ykpC	3369612..3369746 (-)	135	WP_003238865.1	protein YkpC	-
D9C20_RS17965 (D9C20_17965)	mreBH	3369847..3370854 (-)	1008	WP_003245743.1	cell shape-determining protein MreBH	-
D9C20_RS17970 (D9C20_17970)	abrB	3371138..3371416 (+)	279	WP_003244728.1	transcriptional regulator AbhA	Regulator
D9C20_RS17975 (D9C20_17975)	kinC	3371606..3372889 (+)	1284	WP_014479686.1	two-component sensor histidine kinase KinC	-
D9C20_RS17980 (D9C20_17980)	ykqA	3372905..3373738 (+)	834	WP_014479687.1	gamma-glutamylcyclotransferase	-
D9C20_RS17985 (D9C20_17985)	ktrC	3373801..3374466 (+)	666	WP_003222311.1	Ktr system potassium transporter KtrC	-
D9C20_RS17990 (D9C20_17990)	ade	3374621..3376354 (+)	1734	WP_014479688.1	adenine deaminase	-

Sequence

Protein

• Length: 92 a.a.
• Molecular weight: 10256.07 Da
• Isoelectric Point: 5.8808

>NTDB_id=319838 D9C20_RS17970 WP_003244728.1 3371138..3371416(+) (abrB) [Bacillus subtilis subsp. subtilis strain N4-2]
MKSIGVVRKVDELGRIVMPIELRRALDIAIKDSIEFFVDGDKIILKKYKPHGVCLMTGEITSENKEYGNGKITLSPEGAQ
LLLEEIQAALKE

Nucleotide

• Length: 279 bp

>NTDB_id=319838 D9C20_RS17970 WP_003244728.1 3371138..3371416(+) (abrB) [Bacillus subtilis subsp. subtilis strain N4-2]
ATGAAATCAATAGGTGTTGTGAGAAAAGTAGATGAATTAGGCCGCATTGTCATGCCGATTGAGTTGAGACGGGCATTGGA
TATTGCCATAAAAGACAGCATTGAGTTTTTTGTTGACGGAGATAAAATTATCTTGAAAAAGTACAAACCTCATGGCGTTT
GTTTAATGACTGGAGAAATCACTTCAGAAAATAAAGAATACGGCAACGGTAAAATTACGCTAAGCCCTGAGGGTGCACAG
CTGCTTCTCGAAGAAATTCAAGCCGCTTTAAAAGAATAA

Domains

Predicted by InterproScan.

• AbrB C-terminal domain (AbrB_C) (53-88)

• Antidote-toxin recognition MazE, bacterial antitoxin (MazE_antitoxin) (8-51)

3D structure

• AlphaFold DB: A0A199WGU6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
abrB	Bacillus subtilis subsp. subtilis str. 168	58.242	98.913	0.576