Detailed information NTG0319827

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: D9C20_RS16120
• Genome accession: NZ_CP032867
• Coordinates: 3042614..3043567 (+)
• Length: 317 a.a.
• NCBI ID: WP_014479436.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. subtilis strain N4-2
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 3037614..3048567

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D9C20_RS16090 (D9C20_16090)	argF	3038156..3039115 (+)	960	WP_014479432.1	ornithine carbamoyltransferase	-
D9C20_RS16100 (D9C20_16100)	yjzC	3040491..3040670 (+)	180	WP_003245356.1	YjzC family protein	-
D9C20_RS16105 (D9C20_16105)	yjzD	3040716..3040901 (-)	186	WP_003245236.1	DUF2929 domain-containing protein	-
D9C20_RS16110 (D9C20_16110)	-	3041150..3041884 (+)	735	WP_014479433.1	hypothetical protein	-
D9C20_RS16115 (D9C20_16115)	-	3041966..3042523 (+)	558	WP_014479435.1	hypothetical protein	-
D9C20_RS16120 (D9C20_16120)	med	3042614..3043567 (+)	954	WP_014479436.1	transcriptional regulator Med	Regulator
D9C20_RS16125 (D9C20_16125)	comZ	3043582..3043773 (+)	192	WP_003224559.1	ComG operon transcriptional repressor ComZ	Regulator
D9C20_RS16130 (D9C20_16130)	yjzB	3043803..3044030 (-)	228	WP_031600361.1	spore coat protein YjzB	-
D9C20_RS16135 (D9C20_16135)	fabH	3044195..3045133 (+)	939	WP_003232971.1	beta-ketoacyl-ACP synthase III	-
D9C20_RS16140 (D9C20_16140)	fabF	3045156..3046397 (+)	1242	WP_014479438.1	beta-ketoacyl-ACP synthase II	-
D9C20_RS16145 (D9C20_16145)	yjaZ	3046473..3047258 (+)	786	WP_014479439.1	DUF2268 domain-containing protein	-
D9C20_RS16150 (D9C20_16150)	appD	3047450..3048436 (+)	987	WP_003232965.1	oligopeptide ABC transporter ATP-binding protein AppD	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35310.88 Da
• Isoelectric Point: 4.6652

>NTDB_id=319827 D9C20_RS16120 WP_014479436.1 3042614..3043567(+) (med) [Bacillus subtilis subsp. subtilis strain N4-2]
MITRLVMIFSVLLLLSGCGKTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=319827 D9C20_RS16120 WP_014479436.1 3042614..3043567(+) (med) [Bacillus subtilis subsp. subtilis strain N4-2]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGAAAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACGAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTGGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTCCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAATACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGACA
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	99.369	100	0.994