Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | D9C20_RS10095 | Genome accession | NZ_CP032867 |
| Coordinates | 1890384..1890674 (-) | Length | 96 a.a. |
| NCBI ID | WP_003226760.1 | Uniprot ID | A0A7G9PCZ4 |
| Organism | Bacillus subtilis subsp. subtilis strain N4-2 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1885384..1895674
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D9C20_RS10055 (D9C20_10055) | darA | 1885407..1885736 (+) | 330 | WP_003242755.1 | cyclic di-AMP receptor DarA | - |
| D9C20_RS10060 (D9C20_10060) | yaaR | 1885749..1886189 (+) | 441 | WP_009966249.1 | YaaR family protein | - |
| D9C20_RS10065 (D9C20_10065) | holB | 1886201..1887190 (+) | 990 | WP_003226770.1 | DNA polymerase III subunit delta' | - |
| D9C20_RS10070 (D9C20_10070) | ricT | 1887193..1888020 (+) | 828 | WP_003226767.1 | competence/sporulation regulator complex protein RicT | - |
| D9C20_RS10075 (D9C20_10075) | yabA | 1888035..1888394 (+) | 360 | WP_003218308.1 | replication initiation-control protein YabA | - |
| D9C20_RS10080 (D9C20_10080) | trmNF | 1888453..1889196 (+) | 744 | WP_003244526.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| D9C20_RS10085 (D9C20_10085) | yazA | 1889183..1889482 (+) | 300 | WP_003242983.1 | GIY-YIG nuclease family protein | - |
| D9C20_RS10090 (D9C20_10090) | rsmI | 1889457..1890335 (+) | 879 | WP_003243457.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| D9C20_RS10095 (D9C20_10095) | abrB | 1890384..1890674 (-) | 291 | WP_003226760.1 | transition state genes transcriptional regulator AbrB | Regulator |
| D9C20_RS10100 (D9C20_10100) | metG | 1891169..1893163 (+) | 1995 | WP_014478594.1 | methionine--tRNA ligase | - |
| D9C20_RS10105 (D9C20_10105) | dayD | 1893243..1894010 (+) | 768 | WP_014478595.1 | TatD family hydrolase | - |
| D9C20_RS10110 (D9C20_10110) | yabE | 1894166..1895479 (+) | 1314 | WP_003226754.1 | ubiquitin-like domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10772.62 Da Isoelectric Point: 6.3482
>NTDB_id=319810 D9C20_RS10095 WP_003226760.1 1890384..1890674(-) (abrB) [Bacillus subtilis subsp. subtilis strain N4-2]
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
Nucleotide
Download Length: 291 bp
>NTDB_id=319810 D9C20_RS10095 WP_003226760.1 1890384..1890674(-) (abrB) [Bacillus subtilis subsp. subtilis strain N4-2]
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |