Detailed information NTG0319808

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: D9C20_RS09870
• Genome accession: NZ_CP032867
• Coordinates: 1849113..1850225 (+)
• Length: 370 a.a.
• NCBI ID: WP_014478578.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. subtilis strain N4-2
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1844113..1855225

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D9C20_RS09845 (D9C20_09845)	rnpA	1844823..1845173 (-)	351	WP_014481515.1	ribonuclease P protein component	-
D9C20_RS09850 (D9C20_09850)	rpmH	1845325..1845459 (-)	135	WP_003178075.1	50S ribosomal protein L34	-
D9C20_RS09855 (D9C20_09855)	dnaA	1846086..1847426 (+)	1341	WP_003242674.1	chromosomal replication initiator protein DnaA	-
D9C20_RS09860 (D9C20_09860)	dnaN	1847615..1848751 (+)	1137	WP_003226811.1	DNA polymerase III subunit beta	-
D9C20_RS09865 (D9C20_09865)	rlbA	1848882..1849097 (+)	216	WP_003226810.1	ribosome maturation protein RlbA	-
D9C20_RS09870 (D9C20_09870)	recF	1849113..1850225 (+)	1113	WP_014478578.1	DNA replication/repair protein RecF	Machinery gene
D9C20_RS09875 (D9C20_09875)	remB	1850243..1850488 (+)	246	WP_003219266.1	extracellular matrix regulator RemB	-
D9C20_RS09880 (D9C20_09880)	gyrB	1850543..1852459 (+)	1917	WP_003226808.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	-
D9C20_RS09885 (D9C20_09885)	gyrA	1852670..1855135 (+)	2466	WP_003244540.1	DNA topoisomerase (ATP-hydrolyzing) subunit A	-

Sequence

Protein

• Length: 370 a.a.
• Molecular weight: 42304.34 Da
• Isoelectric Point: 7.3660

>NTDB_id=319808 D9C20_RS09870 WP_014478578.1 1849113..1850225(+) (recF) [Bacillus subtilis subsp. subtilis strain N4-2]
MYIQNLELSSYRNYDHAELQFENKVNVIIGENAQGKTNLMEAIYVLSMAKSHRTSNDKELIRWDKDYAKIEGRVMKQNGA
IPMQLVISKKGKKGKVNHIEQQKLSQYVGALNTIMFAPEDLNLVKGSPQVRRRFLDMEIGQVSPVYLHDLSLYQKILSQR
NHFLKQLQTRKQTDRTMLDVLTDQLIEVAAKVVVKRLQFTAQLEKWAQPIHAGISRGLEELTLKYHTALDVSDPLDLSKI
GDSYQEAFSKLREKEIERGVTLSGPHRDDVLFYVNGRDVQTYGSQGQQRTTALSLKLAEIDLIHEEIGEYPILLLDDVLS
ELDDYRQSHLLHTIQGRVQTFVTTTSVDGIDHETLRQAGMFRVQNGALVK

Nucleotide

• Length: 1113 bp

>NTDB_id=319808 D9C20_RS09870 WP_014478578.1 1849113..1850225(+) (recF) [Bacillus subtilis subsp. subtilis strain N4-2]
TTGTATATCCAGAACTTAGAACTTTCATCTTACCGCAACTACGACCATGCTGAACTTCAATTTGAAAATAAAGTAAATGT
GATCATCGGAGAAAACGCCCAGGGGAAGACAAACCTCATGGAGGCGATCTATGTCTTGTCCATGGCGAAATCGCACCGGA
CATCAAATGACAAAGAACTTATACGGTGGGACAAAGACTATGCTAAAATAGAGGGAAGAGTGATGAAGCAAAACGGGGCG
ATCCCGATGCAGCTCGTCATCTCCAAAAAGGGTAAAAAGGGCAAGGTCAATCATATTGAACAGCAAAAGCTCAGCCAGTA
TGTCGGGGCCCTCAACACCATTATGTTCGCGCCGGAAGATTTAAATCTTGTAAAGGGAAGCCCTCAAGTGAGAAGGCGGT
TTCTTGACATGGAAATTGGACAGGTTTCTCCCGTCTATCTTCATGATCTTTCTCTTTACCAGAAAATCCTTTCCCAGCGG
AATCATTTTTTGAAACAGCTGCAAACAAGAAAACAAACTGACCGGACGATGCTCGATGTTCTGACCGATCAGCTTATAGA
AGTTGCAGCAAAAGTCGTCGTAAAACGCCTGCAGTTTACAGCACAGCTCGAGAAATGGGCGCAGCCCATCCATGCAGGCA
TCTCAAGAGGGCTTGAAGAACTTACCCTGAAATACCATACAGCTCTTGATGTATCAGATCCCCTAGATTTGTCGAAAATA
GGAGATAGCTATCAAGAAGCGTTTTCTAAATTAAGAGAAAAAGAAATTGAGCGTGGTGTGACGCTGTCAGGGCCTCATCG
CGATGATGTTCTTTTCTATGTGAACGGACGCGATGTGCAGACGTATGGTTCTCAAGGACAGCAGCGAACGACGGCGTTGT
CCCTTAAGCTGGCGGAGATTGACCTGATCCATGAAGAAATCGGAGAATATCCCATTTTACTATTGGATGATGTACTGAGT
GAACTGGATGATTATCGCCAGTCACACTTGCTTCATACGATCCAAGGCCGTGTACAAACGTTTGTCACAACGACAAGCGT
TGATGGCATTGATCACGAAACCTTACGTCAAGCAGGAATGTTCCGTGTGCAAAATGGTGCGTTAGTGAAGTGA

Domains

Predicted by InterproScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (2-350)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Bacillus subtilis subsp. subtilis str. 168	99.459	100	0.995