Detailed information
Bioinformatically predicted
Overview
| Name | nucA/comI | Type | Machinery gene |
| Locus tag | D9C20_RS01125 | Genome accession | NZ_CP032867 |
| Coordinates | 195514..195924 (-) | Length | 136 a.a. |
| NCBI ID | WP_009967785.1 | Uniprot ID | A0A6I4D881 |
| Organism | Bacillus subtilis subsp. subtilis strain N4-2 | ||
| Function | cleavage of dsDNA into ssDNA (predicted from homology) DNA processing |
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Genomic Context
Location: 190514..200924
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D9C20_RS01095 (D9C20_01095) | - | 190602..190742 (+) | 141 | WP_003226124.1 | sporulation histidine kinase inhibitor Sda | - |
| D9C20_RS01100 (D9C20_01100) | yqeF | 191048..191779 (-) | 732 | WP_003229964.1 | SGNH/GDSL hydrolase family protein | - |
| D9C20_RS01105 (D9C20_01105) | cwlH | 192031..192783 (-) | 753 | WP_014480318.1 | N-acetylmuramoyl-L-alanine amidase CwlH | - |
| D9C20_RS01110 (D9C20_01110) | yqeD | 192970..193596 (+) | 627 | WP_014480319.1 | TVP38/TMEM64 family protein | - |
| D9C20_RS01115 (D9C20_01115) | gnd | 193615..194508 (-) | 894 | WP_014480320.1 | phosphogluconate dehydrogenase (NAD(+)-dependent, decarboxylating) | - |
| D9C20_RS01120 (D9C20_01120) | yqeB | 194759..195481 (+) | 723 | WP_014480321.1 | hypothetical protein | - |
| D9C20_RS01125 (D9C20_01125) | nucA/comI | 195514..195924 (-) | 411 | WP_009967785.1 | sporulation-specific Dnase NucB | Machinery gene |
| D9C20_RS01130 (D9C20_01130) | sigK | 196120..196848 (+) | 729 | WP_013308023.1 | RNA polymerase sporulation sigma factor SigK | - |
| D9C20_RS01135 (D9C20_01135) | - | 196848..196946 (+) | 99 | WP_031600702.1 | hypothetical protein | - |
| D9C20_RS22790 | - | 196943..197155 (-) | 213 | Protein_226 | recombinase family protein | - |
| D9C20_RS01145 (D9C20_01145) | fumC | 197374..198762 (-) | 1389 | WP_014480325.1 | class II fumarate hydratase | - |
| D9C20_RS01150 (D9C20_01150) | - | 198929..199819 (+) | 891 | WP_014480326.1 | LysR family transcriptional regulator | - |
Sequence
Protein
Download Length: 136 a.a. Molecular weight: 14967.97 Da Isoelectric Point: 5.1853
>NTDB_id=319781 D9C20_RS01125 WP_009967785.1 195514..195924(-) (nucA/comI) [Bacillus subtilis subsp. subtilis strain N4-2]
MKKWMAGLFLAAAVLLCLMVPQQIQGASSYDKVLYFPLSRYPETGSHIRDAIAEGHPDICTIDRDGADKRREESLKGIPT
KPGYDRDEWPMAVCEEGGAGADVRYVTPSDNRGAGSWVGNQMSSYPDGTRVLFIVQ
MKKWMAGLFLAAAVLLCLMVPQQIQGASSYDKVLYFPLSRYPETGSHIRDAIAEGHPDICTIDRDGADKRREESLKGIPT
KPGYDRDEWPMAVCEEGGAGADVRYVTPSDNRGAGSWVGNQMSSYPDGTRVLFIVQ
Nucleotide
Download Length: 411 bp
>NTDB_id=319781 D9C20_RS01125 WP_009967785.1 195514..195924(-) (nucA/comI) [Bacillus subtilis subsp. subtilis strain N4-2]
ATGAAAAAATGGATGGCAGGCCTGTTTCTTGCTGCAGCAGTTCTTCTTTGTTTAATGGTTCCGCAACAGATCCAAGGCGC
ATCTTCGTATGACAAAGTGTTATATTTTCCGCTGTCTCGTTATCCGGAAACCGGCAGTCATATTAGAGATGCGATTGCAG
AGGGACATCCAGATATTTGTACCATTGACAGAGATGGAGCAGACAAAAGGCGGGAGGAATCTTTAAAGGGAATCCCGACC
AAGCCGGGCTATGACCGGGATGAGTGGCCGATGGCGGTCTGCGAGGAAGGCGGCGCAGGGGCTGATGTCCGATATGTGAC
GCCTTCTGATAATCGCGGCGCCGGCTCGTGGGTAGGGAATCAAATGAGCAGCTATCCTGACGGCACCAGAGTGCTGTTTA
TTGTGCAGTAG
ATGAAAAAATGGATGGCAGGCCTGTTTCTTGCTGCAGCAGTTCTTCTTTGTTTAATGGTTCCGCAACAGATCCAAGGCGC
ATCTTCGTATGACAAAGTGTTATATTTTCCGCTGTCTCGTTATCCGGAAACCGGCAGTCATATTAGAGATGCGATTGCAG
AGGGACATCCAGATATTTGTACCATTGACAGAGATGGAGCAGACAAAAGGCGGGAGGAATCTTTAAAGGGAATCCCGACC
AAGCCGGGCTATGACCGGGATGAGTGGCCGATGGCGGTCTGCGAGGAAGGCGGCGCAGGGGCTGATGTCCGATATGTGAC
GCCTTCTGATAATCGCGGCGCCGGCTCGTGGGTAGGGAATCAAATGAGCAGCTATCCTGACGGCACCAGAGTGCTGTTTA
TTGTGCAGTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nucA/comI | Bacillus subtilis subsp. subtilis str. 168 |
62.609 |
84.559 |
0.529 |