Detailed information    

insolico Bioinformatically predicted

Overview


Name   comS   Type   Regulator
Locus tag   D9C18_RS22965 Genome accession   NZ_CP032865
Coordinates   1514895..1515035 (-) Length   46 a.a.
NCBI ID   WP_225910706.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain N3-1     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 1509895..1520035
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D9C18_RS22960 - 1513777..1514949 (-) 1173 Protein_1584 condensation domain-containing protein -
  D9C18_RS22965 comS 1514895..1515035 (-) 141 WP_225910706.1 competence protein ComS Regulator
  D9C18_RS22970 srfAB 1515127..1518171 (-) 3045 Protein_1586 surfactin non-ribosomal peptide synthetase SrfAB -

Sequence


Protein


Download         Length: 46 a.a.        Molecular weight: 5260.11 Da        Isoelectric Point: 8.7633

>NTDB_id=319765 D9C18_RS22965 WP_225910706.1 1514895..1515035(-) (comS) [Bacillus subtilis subsp. subtilis strain N3-1]
MNRSGKHLISCIILYPRPSGECISSISLDKQTQATTSPLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=319765 D9C18_RS22965 WP_225910706.1 1514895..1515035(-) (comS) [Bacillus subtilis subsp. subtilis strain N3-1]
TTGAACCGATCAGGCAAGCATCTTATCAGCTGCATTATCCTGTATCCCCGGCCCAGCGGAGAATGTATATCCTCAATCAG
CTTGGACAAGCAAACACAAGCTACAACGTCCCCGCTGTACTTCTGCTGGAGGGAGAAGTAG

Domains


Predicted by InterproScan.

(1-44)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

97.826

100

0.978


Multiple sequence alignment