Detailed information NTG0319721

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: D9C18_RS10130
• Genome accession: NZ_CP032865
• Coordinates: 1897925..1899037 (-)
• Length: 370 a.a.
• NCBI ID: WP_014478578.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. subtilis strain N3-1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1892925..1904037

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D9C18_RS10115 (D9C18_10115)	gyrA	1893015..1895480 (-)	2466	WP_003244540.1	DNA topoisomerase (ATP-hydrolyzing) subunit A	-
D9C18_RS10120 (D9C18_10120)	gyrB	1895691..1897607 (-)	1917	WP_003226808.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	-
D9C18_RS10125 (D9C18_10125)	remB	1897662..1897907 (-)	246	WP_003219266.1	extracellular matrix regulator RemB	-
D9C18_RS10130 (D9C18_10130)	recF	1897925..1899037 (-)	1113	WP_014478578.1	DNA replication/repair protein RecF	Machinery gene
D9C18_RS10135 (D9C18_10135)	rlbA	1899053..1899268 (-)	216	WP_003226810.1	ribosome maturation protein RlbA	-
D9C18_RS10140 (D9C18_10140)	dnaN	1899399..1900535 (-)	1137	WP_003226811.1	DNA polymerase III subunit beta	-
D9C18_RS10145 (D9C18_10145)	dnaA	1900724..1902064 (-)	1341	WP_003242674.1	chromosomal replication initiator protein DnaA	-
D9C18_RS10150 (D9C18_10150)	rpmH	1902691..1902825 (+)	135	WP_003178075.1	50S ribosomal protein L34	-
D9C18_RS10155 (D9C18_10155)	rnpA	1902977..1903327 (+)	351	WP_014481515.1	ribonuclease P protein component	-

Sequence

Protein

• Length: 370 a.a.
• Molecular weight: 42304.34 Da
• Isoelectric Point: 7.3660

>NTDB_id=319721 D9C18_RS10130 WP_014478578.1 1897925..1899037(-) (recF) [Bacillus subtilis subsp. subtilis strain N3-1]
MYIQNLELSSYRNYDHAELQFENKVNVIIGENAQGKTNLMEAIYVLSMAKSHRTSNDKELIRWDKDYAKIEGRVMKQNGA
IPMQLVISKKGKKGKVNHIEQQKLSQYVGALNTIMFAPEDLNLVKGSPQVRRRFLDMEIGQVSPVYLHDLSLYQKILSQR
NHFLKQLQTRKQTDRTMLDVLTDQLIEVAAKVVVKRLQFTAQLEKWAQPIHAGISRGLEELTLKYHTALDVSDPLDLSKI
GDSYQEAFSKLREKEIERGVTLSGPHRDDVLFYVNGRDVQTYGSQGQQRTTALSLKLAEIDLIHEEIGEYPILLLDDVLS
ELDDYRQSHLLHTIQGRVQTFVTTTSVDGIDHETLRQAGMFRVQNGALVK

Nucleotide

• Length: 1113 bp

>NTDB_id=319721 D9C18_RS10130 WP_014478578.1 1897925..1899037(-) (recF) [Bacillus subtilis subsp. subtilis strain N3-1]
TTGTATATCCAGAACTTAGAACTTTCATCTTACCGCAACTACGACCATGCTGAACTTCAATTTGAAAATAAAGTAAATGT
GATCATCGGAGAAAACGCCCAGGGGAAGACAAACCTCATGGAGGCGATCTATGTCTTGTCCATGGCGAAATCGCACCGGA
CATCAAATGACAAAGAACTTATACGGTGGGACAAAGACTATGCTAAAATAGAGGGAAGAGTGATGAAGCAAAACGGGGCG
ATCCCGATGCAGCTCGTCATCTCCAAAAAGGGTAAAAAGGGCAAGGTCAATCATATTGAACAGCAAAAGCTCAGCCAGTA
TGTCGGGGCCCTCAACACCATTATGTTCGCGCCGGAAGATTTAAATCTTGTAAAGGGAAGCCCTCAAGTGAGAAGGCGGT
TTCTTGACATGGAAATTGGACAGGTTTCTCCCGTCTATCTTCATGATCTTTCTCTTTACCAGAAAATCCTTTCCCAGCGG
AATCATTTTTTGAAACAGCTGCAAACAAGAAAACAAACTGACCGGACGATGCTCGATGTTCTGACCGATCAGCTTATAGA
AGTTGCAGCAAAAGTCGTCGTAAAACGCCTGCAGTTTACAGCACAGCTCGAGAAATGGGCGCAGCCCATCCATGCAGGCA
TCTCAAGAGGGCTTGAAGAACTTACCCTGAAATACCATACAGCTCTTGATGTATCAGATCCCCTAGATTTGTCGAAAATA
GGAGATAGCTATCAAGAAGCGTTTTCTAAATTAAGAGAAAAAGAAATTGAGCGTGGTGTGACGCTGTCAGGGCCTCATCG
CGATGATGTTCTTTTCTATGTGAACGGACGCGATGTGCAGACGTATGGTTCTCAAGGACAGCAGCGAACGACGGCGTTGT
CCCTTAAGCTGGCGGAGATTGACCTGATCCATGAAGAAATCGGAGAATATCCCATTTTACTATTGGATGATGTACTGAGT
GAACTGGATGATTATCGCCAGTCACACTTGCTTCATACGATCCAAGGCCGTGTACAAACGTTTGTCACAACGACAAGCGT
TGATGGCATTGATCACGAAACCTTACGTCAAGCAGGAATGTTCCGTGTGCAAAATGGTGCGTTAGTGAAGTGA

Domains

Predicted by InterproScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (2-350)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Bacillus subtilis subsp. subtilis str. 168	99.459	100	0.995