Detailed information    

insolico Bioinformatically predicted

Overview


Name   nin/comJ   Type   Regulator
Locus tag   D9C18_RS08150 Genome accession   NZ_CP032865
Coordinates   1533782..1534180 (+) Length   132 a.a.
NCBI ID   WP_014478800.1    Uniprot ID   A0A0D1L5A4
Organism   Bacillus subtilis subsp. subtilis strain N3-1     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context


Location: 1528782..1539180
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D9C18_RS08125 (D9C18_08125) hxlR 1529520..1529882 (-) 363 WP_003246265.1 transcriptional activator HxlR -
  D9C18_RS08130 (D9C18_08130) hxlA 1530111..1530743 (+) 633 WP_014478804.1 3-hexulose-6-phosphate synthase -
  D9C18_RS08135 (D9C18_08135) hxlB 1530749..1531306 (+) 558 WP_014478803.1 6-phospho-3-hexuloisomerase -
  D9C18_RS08140 (D9C18_08140) tlpC 1531417..1533138 (+) 1722 Protein_1591 methyl-accepting chemotaxis protein TlpC -
  D9C18_RS08145 (D9C18_08145) nucA/comI 1533306..1533755 (+) 450 WP_014475770.1 DNA-entry nuclease Machinery gene
  D9C18_RS08150 (D9C18_08150) nin/comJ 1533782..1534180 (+) 399 WP_014478800.1 DNA-entry nuclease inhibitor Regulator
  D9C18_RS08155 (D9C18_08155) bglC 1534217..1535650 (-) 1434 WP_014478799.1 6-phospho-beta-glucosidase -
  D9C18_RS08160 (D9C18_08160) - 1535723..1536467 (-) 745 Protein_1595 AAA family ATPase -
  D9C18_RS08165 (D9C18_08165) - 1536486..1536806 (-) 321 WP_014478796.1 DUF3147 family protein -
  D9C18_RS08170 (D9C18_08170) - 1536794..1537216 (-) 423 WP_014478795.1 MarR family transcriptional regulator -
  D9C18_RS08175 (D9C18_08175) yckD 1537344..1537676 (-) 333 WP_014478794.1 YckD family protein -
  D9C18_RS08180 (D9C18_08180) yckC 1537758..1538213 (-) 456 WP_014478793.1 RDD family protein -
  D9C18_RS08185 (D9C18_08185) - 1538233..1538430 (-) 198 WP_121509395.1 hypothetical protein -

Sequence


Protein


Download         Length: 132 a.a.        Molecular weight: 15006.98 Da        Isoelectric Point: 4.8991

>NTDB_id=319715 D9C18_RS08150 WP_014478800.1 1533782..1534180(+) (nin/comJ) [Bacillus subtilis subsp. subtilis strain N3-1]
MIKSWKPQELSISYHQFTVFQKDSTPPIMDWTDEAIEKGYTAADGAISFEAQRNTKAFILLRLNSSETVNSYEKKVTVPF
HVTENGIHIESIMSKRLSFDLPKGDYQLTCWTVPAEMSDLHADTYIIDAVSV

Nucleotide


Download         Length: 399 bp        

>NTDB_id=319715 D9C18_RS08150 WP_014478800.1 1533782..1534180(+) (nin/comJ) [Bacillus subtilis subsp. subtilis strain N3-1]
TTGATCAAATCATGGAAGCCGCAAGAACTTTCGATTTCATATCATCAATTTACTGTATTTCAAAAGGATTCTACACCTCC
TATAATGGATTGGACTGACGAAGCGATTGAAAAAGGATATACTGCGGCAGACGGAGCCATTTCATTTGAGGCACAGCGAA
ATACAAAGGCCTTTATTCTTTTGCGCCTGAACAGTTCAGAAACAGTAAACTCCTACGAAAAAAAAGTGACTGTTCCTTTT
CATGTCACAGAAAACGGAATTCATATTGAAAGCATTATGTCTAAGAGACTGTCCTTTGATCTGCCTAAAGGAGACTATCA
ATTGACATGCTGGACTGTGCCGGCTGAAATGTCAGATTTGCACGCCGACACTTATATTATTGATGCTGTTTCTGTGTAA

Domains


Predicted by InterproScan.

(9-129)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0D1L5A4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

97.727

100

0.977


Multiple sequence alignment