Detailed information NTG0319702

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: D9C18_RS03880
• Genome accession: NZ_CP032865
• Coordinates: 704585..705538 (-)
• Length: 317 a.a.
• NCBI ID: WP_014479436.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. subtilis strain N3-1
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 699585..710538

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D9C18_RS03850 (D9C18_03850)	appD	699716..700702 (-)	987	WP_003232965.1	oligopeptide ABC transporter ATP-binding protein AppD	-
D9C18_RS03855 (D9C18_03855)	yjaZ	700894..701679 (-)	786	WP_014479439.1	DUF2268 domain-containing protein	-
D9C18_RS03860 (D9C18_03860)	fabF	701755..702996 (-)	1242	WP_014479438.1	beta-ketoacyl-ACP synthase II	-
D9C18_RS03865 (D9C18_03865)	fabH	703019..703957 (-)	939	WP_003232971.1	beta-ketoacyl-ACP synthase III	-
D9C18_RS03870 (D9C18_03870)	yjzB	704122..704349 (+)	228	WP_031600361.1	spore coat protein YjzB	-
D9C18_RS03875 (D9C18_03875)	comZ	704379..704570 (-)	192	WP_003224559.1	ComG operon transcriptional repressor ComZ	Regulator
D9C18_RS03880 (D9C18_03880)	med	704585..705538 (-)	954	WP_014479436.1	transcriptional regulator Med	Regulator
D9C18_RS03885 (D9C18_03885)	-	705629..706186 (-)	558	WP_014479435.1	hypothetical protein	-
D9C18_RS03890 (D9C18_03890)	-	706268..707002 (-)	735	WP_014479433.1	hypothetical protein	-
D9C18_RS03895 (D9C18_03895)	yjzD	707251..707436 (+)	186	WP_003245236.1	DUF2929 domain-containing protein	-
D9C18_RS03900 (D9C18_03900)	yjzC	707482..707661 (-)	180	WP_003245356.1	YjzC family protein	-
D9C18_RS03905 (D9C18_03905)	-	707839..708989 (+)	1151	WP_087614160.1	IS3 family transposase	-
D9C18_RS03910 (D9C18_03910)	argF	709037..709996 (-)	960	WP_014479432.1	ornithine carbamoyltransferase	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35310.88 Da
• Isoelectric Point: 4.6652

>NTDB_id=319702 D9C18_RS03880 WP_014479436.1 704585..705538(-) (med) [Bacillus subtilis subsp. subtilis strain N3-1]
MITRLVMIFSVLLLLSGCGKTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=319702 D9C18_RS03880 WP_014479436.1 704585..705538(-) (med) [Bacillus subtilis subsp. subtilis strain N3-1]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGAAAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACGAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTGGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTCCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAATACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGACA
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	99.369	100	0.994