Detailed information    

insolico Bioinformatically predicted

Overview


Name   comS   Type   Regulator
Locus tag   D9C17_RS23045 Genome accession   NZ_CP032863
Coordinates   2663083..2663223 (+) Length   46 a.a.
NCBI ID   WP_225910706.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain N2-2     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 2658083..2668223
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D9C17_RS23040 srfAB 2660016..2662991 (+) 2976 Protein_2768 surfactin non-ribosomal peptide synthetase SrfAB -
  D9C17_RS23045 comS 2663083..2663223 (+) 141 WP_225910706.1 competence protein ComS Regulator
  D9C17_RS23315 srfAB 2663169..2665928 (+) 2760 Protein_2770 surfactin non-ribosomal peptide synthetase SrfAB -

Sequence


Protein


Download         Length: 46 a.a.        Molecular weight: 5260.11 Da        Isoelectric Point: 8.7633

>NTDB_id=319686 D9C17_RS23045 WP_225910706.1 2663083..2663223(+) (comS) [Bacillus subtilis subsp. subtilis strain N2-2]
MNRSGKHLISCIILYPRPSGECISSISLDKQTQATTSPLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=319686 D9C17_RS23045 WP_225910706.1 2663083..2663223(+) (comS) [Bacillus subtilis subsp. subtilis strain N2-2]
TTGAACCGATCAGGCAAGCATCTTATCAGCTGCATTATCCTGTATCCCCGGCCCAGCGGAGAATGTATATCCTCAATCAG
CTTGGACAAGCAAACACAAGCTACAACGTCCCCGCTGTACTTCTGCTGGAGGGAGAAGTAG

Domains


Predicted by InterproScan.

(1-44)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

97.826

100

0.978


Multiple sequence alignment