Detailed information    

insolico Bioinformatically predicted

Overview


Name   recX   Type   Regulator
Locus tag   D9C17_RS17040 Genome accession   NZ_CP032863
Coordinates   3181353..3182147 (+) Length   264 a.a.
NCBI ID   WP_014479217.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain N2-2     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context


Location: 3176353..3187147
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D9C17_RS17010 (D9C17_17010) sxzA 3177193..3178224 (+) 1032 WP_003233568.1 iron ABC transporter permease -
  D9C17_RS17015 (D9C17_17015) yfhB 3178339..3179220 (+) 882 WP_014479213.1 PhzF family phenazine biosynthesis isomerase -
  D9C17_RS17020 (D9C17_17020) yfhC 3179308..3179892 (+) 585 WP_033881364.1 nitroreductase -
  D9C17_RS17025 (D9C17_17025) yfhD 3179931..3180122 (-) 192 WP_014479215.1 YfhD family protein -
  D9C17_RS17030 (D9C17_17030) yfhE 3180188..3180298 (-) 111 WP_003223230.1 YfhE family protein -
  D9C17_RS17035 (D9C17_17035) yfhF 3180353..3181264 (-) 912 WP_014479216.1 TIGR01777 family oxidoreductase -
  D9C17_RS17040 (D9C17_17040) recX 3181353..3182147 (+) 795 WP_014479217.1 recombination regulator RecX Regulator
  D9C17_RS17045 (D9C17_17045) yfhH 3182149..3182463 (+) 315 WP_003244592.1 YfhH family protein -
  D9C17_RS17050 (D9C17_17050) yfhI 3182606..3183799 (+) 1194 WP_003243500.1 MFS transporter -
  D9C17_RS17055 (D9C17_17055) sspK 3183831..3183983 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  D9C17_RS17060 (D9C17_17060) yfhJ 3184108..3184377 (+) 270 WP_003243789.1 YfhJ family protein -
  D9C17_RS17065 (D9C17_17065) yfhK 3184522..3185040 (+) 519 WP_014479218.1 SH3 domain-containing protein -
  D9C17_RS17070 (D9C17_17070) spdL 3185125..3185457 (+) 333 WP_014479219.1 SdpC immunity protein SpdL -
  D9C17_RS17075 (D9C17_17075) ephM 3185444..3186304 (+) 861 WP_014479220.1 epoxide hydrolase EphM -

Sequence


Protein


Download         Length: 264 a.a.        Molecular weight: 31029.21 Da        Isoelectric Point: 6.6686

>NTDB_id=319663 D9C17_RS17040 WP_014479217.1 3181353..3182147(+) (recX) [Bacillus subtilis subsp. subtilis strain N2-2]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAIK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=319663 D9C17_RS17040 WP_014479217.1 3181353..3182147(+) (recX) [Bacillus subtilis subsp. subtilis strain N2-2]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACGG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATTAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains


Predicted by InterproScan.

(84-204)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.242

100

0.992


Multiple sequence alignment