Detailed information    

insolico Bioinformatically predicted

Overview


Name   nin/comJ   Type   Regulator
Locus tag   D9C17_RS14355 Genome accession   NZ_CP032863
Coordinates   2643938..2644336 (-) Length   132 a.a.
NCBI ID   WP_014478800.1    Uniprot ID   A0A0D1L5A4
Organism   Bacillus subtilis subsp. subtilis strain N2-2     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context


Location: 2638938..2649336
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D9C17_RS14320 (D9C17_14320) - 2639688..2639885 (+) 198 WP_121509395.1 hypothetical protein -
  D9C17_RS14325 (D9C17_14325) yckC 2639905..2640360 (+) 456 WP_014478793.1 RDD family protein -
  D9C17_RS14330 (D9C17_14330) yckD 2640442..2640774 (+) 333 WP_014478794.1 YckD family protein -
  D9C17_RS14335 (D9C17_14335) - 2640902..2641324 (+) 423 WP_014478795.1 MarR family transcriptional regulator -
  D9C17_RS14340 (D9C17_14340) - 2641312..2641632 (+) 321 WP_014478796.1 DUF3147 family protein -
  D9C17_RS14345 (D9C17_14345) - 2641651..2642395 (+) 745 Protein_2759 AAA family ATPase -
  D9C17_RS14350 (D9C17_14350) bglC 2642468..2643901 (+) 1434 WP_014478799.1 6-phospho-beta-glucosidase -
  D9C17_RS14355 (D9C17_14355) nin/comJ 2643938..2644336 (-) 399 WP_014478800.1 DNA-entry nuclease inhibitor Regulator
  D9C17_RS14360 (D9C17_14360) nucA/comI 2644363..2644812 (-) 450 WP_014475770.1 DNA-entry nuclease Machinery gene
  D9C17_RS14365 (D9C17_14365) tlpC 2644980..2646701 (-) 1722 Protein_2763 methyl-accepting chemotaxis protein TlpC -
  D9C17_RS14370 (D9C17_14370) hxlB 2646812..2647369 (-) 558 WP_014478803.1 6-phospho-3-hexuloisomerase -
  D9C17_RS14375 (D9C17_14375) hxlA 2647375..2648007 (-) 633 WP_014478804.1 3-hexulose-6-phosphate synthase -
  D9C17_RS14380 (D9C17_14380) hxlR 2648236..2648598 (+) 363 WP_003246265.1 transcriptional activator HxlR -

Sequence


Protein


Download         Length: 132 a.a.        Molecular weight: 15006.98 Da        Isoelectric Point: 4.8991

>NTDB_id=319657 D9C17_RS14355 WP_014478800.1 2643938..2644336(-) (nin/comJ) [Bacillus subtilis subsp. subtilis strain N2-2]
MIKSWKPQELSISYHQFTVFQKDSTPPIMDWTDEAIEKGYTAADGAISFEAQRNTKAFILLRLNSSETVNSYEKKVTVPF
HVTENGIHIESIMSKRLSFDLPKGDYQLTCWTVPAEMSDLHADTYIIDAVSV

Nucleotide


Download         Length: 399 bp        

>NTDB_id=319657 D9C17_RS14355 WP_014478800.1 2643938..2644336(-) (nin/comJ) [Bacillus subtilis subsp. subtilis strain N2-2]
TTGATCAAATCATGGAAGCCGCAAGAACTTTCGATTTCATATCATCAATTTACTGTATTTCAAAAGGATTCTACACCTCC
TATAATGGATTGGACTGACGAAGCGATTGAAAAAGGATATACTGCGGCAGACGGAGCCATTTCATTTGAGGCACAGCGAA
ATACAAAGGCCTTTATTCTTTTGCGCCTGAACAGTTCAGAAACAGTAAACTCCTACGAAAAAAAAGTGACTGTTCCTTTT
CATGTCACAGAAAACGGAATTCATATTGAAAGCATTATGTCTAAGAGACTGTCCTTTGATCTGCCTAAAGGAGACTATCA
ATTGACATGCTGGACTGTGCCGGCTGAAATGTCAGATTTGCACGCCGACACTTATATTATTGATGCTGTTTCTGTGTAA

Domains


Predicted by InterproScan.

(9-129)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0D1L5A4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

97.727

100

0.977


Multiple sequence alignment