Detailed information NTG0319651

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: D9C17_RS12370
• Genome accession: NZ_CP032863
• Coordinates: 2277495..2278607 (+)
• Length: 370 a.a.
• NCBI ID: WP_014478578.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. subtilis strain N2-2
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2272495..2283607

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D9C17_RS12345 (D9C17_12345)	rnpA	2273205..2273555 (-)	351	WP_014481515.1	ribonuclease P protein component	-
D9C17_RS12350 (D9C17_12350)	rpmH	2273707..2273841 (-)	135	WP_003178075.1	50S ribosomal protein L34	-
D9C17_RS12355 (D9C17_12355)	dnaA	2274468..2275808 (+)	1341	WP_003242674.1	chromosomal replication initiator protein DnaA	-
D9C17_RS12360 (D9C17_12360)	dnaN	2275997..2277133 (+)	1137	WP_003226811.1	DNA polymerase III subunit beta	-
D9C17_RS12365 (D9C17_12365)	rlbA	2277264..2277479 (+)	216	WP_003226810.1	ribosome maturation protein RlbA	-
D9C17_RS12370 (D9C17_12370)	recF	2277495..2278607 (+)	1113	WP_014478578.1	DNA replication/repair protein RecF	Machinery gene
D9C17_RS12375 (D9C17_12375)	remB	2278625..2278870 (+)	246	WP_003219266.1	extracellular matrix regulator RemB	-
D9C17_RS12380 (D9C17_12380)	gyrB	2278925..2280841 (+)	1917	WP_003226808.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	-
D9C17_RS12385 (D9C17_12385)	gyrA	2281052..2283517 (+)	2466	WP_003244540.1	DNA topoisomerase (ATP-hydrolyzing) subunit A	-

Sequence

Protein

• Length: 370 a.a.
• Molecular weight: 42304.34 Da
• Isoelectric Point: 7.3660

>NTDB_id=319651 D9C17_RS12370 WP_014478578.1 2277495..2278607(+) (recF) [Bacillus subtilis subsp. subtilis strain N2-2]
MYIQNLELSSYRNYDHAELQFENKVNVIIGENAQGKTNLMEAIYVLSMAKSHRTSNDKELIRWDKDYAKIEGRVMKQNGA
IPMQLVISKKGKKGKVNHIEQQKLSQYVGALNTIMFAPEDLNLVKGSPQVRRRFLDMEIGQVSPVYLHDLSLYQKILSQR
NHFLKQLQTRKQTDRTMLDVLTDQLIEVAAKVVVKRLQFTAQLEKWAQPIHAGISRGLEELTLKYHTALDVSDPLDLSKI
GDSYQEAFSKLREKEIERGVTLSGPHRDDVLFYVNGRDVQTYGSQGQQRTTALSLKLAEIDLIHEEIGEYPILLLDDVLS
ELDDYRQSHLLHTIQGRVQTFVTTTSVDGIDHETLRQAGMFRVQNGALVK

Nucleotide

• Length: 1113 bp

>NTDB_id=319651 D9C17_RS12370 WP_014478578.1 2277495..2278607(+) (recF) [Bacillus subtilis subsp. subtilis strain N2-2]
TTGTATATCCAGAACTTAGAACTTTCATCTTACCGCAACTACGACCATGCTGAACTTCAATTTGAAAATAAAGTAAATGT
GATCATCGGAGAAAACGCCCAGGGGAAGACAAACCTCATGGAGGCGATCTATGTCTTGTCCATGGCGAAATCGCACCGGA
CATCAAATGACAAAGAACTTATACGGTGGGACAAAGACTATGCTAAAATAGAGGGAAGAGTGATGAAGCAAAACGGGGCG
ATCCCGATGCAGCTCGTCATCTCCAAAAAGGGTAAAAAGGGCAAGGTCAATCATATTGAACAGCAAAAGCTCAGCCAGTA
TGTCGGGGCCCTCAACACCATTATGTTCGCGCCGGAAGATTTAAATCTTGTAAAGGGAAGCCCTCAAGTGAGAAGGCGGT
TTCTTGACATGGAAATTGGACAGGTTTCTCCCGTCTATCTTCATGATCTTTCTCTTTACCAGAAAATCCTTTCCCAGCGG
AATCATTTTTTGAAACAGCTGCAAACAAGAAAACAAACTGACCGGACGATGCTCGATGTTCTGACCGATCAGCTTATAGA
AGTTGCAGCAAAAGTCGTCGTAAAACGCCTGCAGTTTACAGCACAGCTCGAGAAATGGGCGCAGCCCATCCATGCAGGCA
TCTCAAGAGGGCTTGAAGAACTTACCCTGAAATACCATACAGCTCTTGATGTATCAGATCCCCTAGATTTGTCGAAAATA
GGAGATAGCTATCAAGAAGCGTTTTCTAAATTAAGAGAAAAAGAAATTGAGCGTGGTGTGACGCTGTCAGGGCCTCATCG
CGATGATGTTCTTTTCTATGTGAACGGACGCGATGTGCAGACGTATGGTTCTCAAGGACAGCAGCGAACGACGGCGTTGT
CCCTTAAGCTGGCGGAGATTGACCTGATCCATGAAGAAATCGGAGAATATCCCATTTTACTATTGGATGATGTACTGAGT
GAACTGGATGATTATCGCCAGTCACACTTGCTTCATACGATCCAAGGCCGTGTACAAACGTTTGTCACAACGACAAGCGT
TGATGGCATTGATCACGAAACCTTACGTCAAGCAGGAATGTTCCGTGTGCAAAATGGTGCGTTAGTGAAGTGA

Domains

Predicted by InterproScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (2-350)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Bacillus subtilis subsp. subtilis str. 168	99.459	100	0.995