Detailed information    

insolico Bioinformatically predicted

Overview


Name   comS   Type   Regulator
Locus tag   D9C16_RS22910 Genome accession   NZ_CP032861
Coordinates   2142110..2142250 (-) Length   46 a.a.
NCBI ID   WP_225910706.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain N1-1     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 2137110..2147250
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D9C16_RS22905 - 2140992..2142164 (-) 1173 Protein_2302 condensation domain-containing protein -
  D9C16_RS22910 comS 2142110..2142250 (-) 141 WP_225910706.1 competence protein ComS Regulator
  D9C16_RS22915 srfAB 2142342..2145386 (-) 3045 Protein_2304 surfactin non-ribosomal peptide synthetase SrfAB -

Sequence


Protein


Download         Length: 46 a.a.        Molecular weight: 5260.11 Da        Isoelectric Point: 8.7633

>NTDB_id=319607 D9C16_RS22910 WP_225910706.1 2142110..2142250(-) (comS) [Bacillus subtilis subsp. subtilis strain N1-1]
MNRSGKHLISCIILYPRPSGECISSISLDKQTQATTSPLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=319607 D9C16_RS22910 WP_225910706.1 2142110..2142250(-) (comS) [Bacillus subtilis subsp. subtilis strain N1-1]
TTGAACCGATCAGGCAAGCATCTTATCAGCTGCATTATCCTGTATCCCCGGCCCAGCGGAGAATGTATATCCTCAATCAG
CTTGGACAAGCAAACACAAGCTACAACGTCCCCGCTGTACTTCTGCTGGAGGGAGAAGTAG

Domains


Predicted by InterproScan.

(1-44)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

97.826

100

0.978


Multiple sequence alignment