Detailed information NTG0319580

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: D9C16_RS13760
• Genome accession: NZ_CP032861
• Coordinates: 2525133..2526245 (-)
• Length: 370 a.a.
• NCBI ID: WP_014478578.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. subtilis strain N1-1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2520133..2531245

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D9C16_RS13745 (D9C16_13745)	gyrA	2520223..2522688 (-)	2466	WP_003244540.1	DNA topoisomerase (ATP-hydrolyzing) subunit A	-
D9C16_RS13750 (D9C16_13750)	gyrB	2522899..2524815 (-)	1917	WP_003226808.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	-
D9C16_RS13755 (D9C16_13755)	remB	2524870..2525115 (-)	246	WP_003219266.1	extracellular matrix regulator RemB	-
D9C16_RS13760 (D9C16_13760)	recF	2525133..2526245 (-)	1113	WP_014478578.1	DNA replication/repair protein RecF	Machinery gene
D9C16_RS13765 (D9C16_13765)	rlbA	2526261..2526476 (-)	216	WP_003226810.1	ribosome maturation protein RlbA	-
D9C16_RS13770 (D9C16_13770)	dnaN	2526607..2527743 (-)	1137	WP_003226811.1	DNA polymerase III subunit beta	-
D9C16_RS13775 (D9C16_13775)	dnaA	2527932..2529272 (-)	1341	WP_003242674.1	chromosomal replication initiator protein DnaA	-
D9C16_RS13780 (D9C16_13780)	rpmH	2529899..2530033 (+)	135	WP_003178075.1	50S ribosomal protein L34	-
D9C16_RS13785 (D9C16_13785)	rnpA	2530185..2530535 (+)	351	WP_014481515.1	ribonuclease P protein component	-

Sequence

Protein

• Length: 370 a.a.
• Molecular weight: 42304.34 Da
• Isoelectric Point: 7.3660

>NTDB_id=319580 D9C16_RS13760 WP_014478578.1 2525133..2526245(-) (recF) [Bacillus subtilis subsp. subtilis strain N1-1]
MYIQNLELSSYRNYDHAELQFENKVNVIIGENAQGKTNLMEAIYVLSMAKSHRTSNDKELIRWDKDYAKIEGRVMKQNGA
IPMQLVISKKGKKGKVNHIEQQKLSQYVGALNTIMFAPEDLNLVKGSPQVRRRFLDMEIGQVSPVYLHDLSLYQKILSQR
NHFLKQLQTRKQTDRTMLDVLTDQLIEVAAKVVVKRLQFTAQLEKWAQPIHAGISRGLEELTLKYHTALDVSDPLDLSKI
GDSYQEAFSKLREKEIERGVTLSGPHRDDVLFYVNGRDVQTYGSQGQQRTTALSLKLAEIDLIHEEIGEYPILLLDDVLS
ELDDYRQSHLLHTIQGRVQTFVTTTSVDGIDHETLRQAGMFRVQNGALVK

Nucleotide

• Length: 1113 bp

>NTDB_id=319580 D9C16_RS13760 WP_014478578.1 2525133..2526245(-) (recF) [Bacillus subtilis subsp. subtilis strain N1-1]
TTGTATATCCAGAACTTAGAACTTTCATCTTACCGCAACTACGACCATGCTGAACTTCAATTTGAAAATAAAGTAAATGT
GATCATCGGAGAAAACGCCCAGGGGAAGACAAACCTCATGGAGGCGATCTATGTCTTGTCCATGGCGAAATCGCACCGGA
CATCAAATGACAAAGAACTTATACGGTGGGACAAAGACTATGCTAAAATAGAGGGAAGAGTGATGAAGCAAAACGGGGCG
ATCCCGATGCAGCTCGTCATCTCCAAAAAGGGTAAAAAGGGCAAGGTCAATCATATTGAACAGCAAAAGCTCAGCCAGTA
TGTCGGGGCCCTCAACACCATTATGTTCGCGCCGGAAGATTTAAATCTTGTAAAGGGAAGCCCTCAAGTGAGAAGGCGGT
TTCTTGACATGGAAATTGGACAGGTTTCTCCCGTCTATCTTCATGATCTTTCTCTTTACCAGAAAATCCTTTCCCAGCGG
AATCATTTTTTGAAACAGCTGCAAACAAGAAAACAAACTGACCGGACGATGCTCGATGTTCTGACCGATCAGCTTATAGA
AGTTGCAGCAAAAGTCGTCGTAAAACGCCTGCAGTTTACAGCACAGCTCGAGAAATGGGCGCAGCCCATCCATGCAGGCA
TCTCAAGAGGGCTTGAAGAACTTACCCTGAAATACCATACAGCTCTTGATGTATCAGATCCCCTAGATTTGTCGAAAATA
GGAGATAGCTATCAAGAAGCGTTTTCTAAATTAAGAGAAAAAGAAATTGAGCGTGGTGTGACGCTGTCAGGGCCTCATCG
CGATGATGTTCTTTTCTATGTGAACGGACGCGATGTGCAGACGTATGGTTCTCAAGGACAGCAGCGAACGACGGCGTTGT
CCCTTAAGCTGGCGGAGATTGACCTGATCCATGAAGAAATCGGAGAATATCCCATTTTACTATTGGATGATGTACTGAGT
GAACTGGATGATTATCGCCAGTCACACTTGCTTCATACGATCCAAGGCCGTGTACAAACGTTTGTCACAACGACAAGCGT
TGATGGCATTGATCACGAAACCTTACGTCAAGCAGGAATGTTCCGTGTGCAAAATGGTGCGTTAGTGAAGTGA

Domains

Predicted by InterproScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (2-350)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Bacillus subtilis subsp. subtilis str. 168	99.459	100	0.995