Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | D9C16_RS13535 | Genome accession | NZ_CP032861 |
| Coordinates | 2484685..2484975 (+) | Length | 96 a.a. |
| NCBI ID | WP_003226760.1 | Uniprot ID | A0A7G9PCZ4 |
| Organism | Bacillus subtilis subsp. subtilis strain N1-1 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2479685..2489975
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D9C16_RS13520 (D9C16_13520) | yabE | 2479880..2481193 (-) | 1314 | WP_003226754.1 | ubiquitin-like domain-containing protein | - |
| D9C16_RS13525 (D9C16_13525) | dayD | 2481349..2482116 (-) | 768 | WP_014478595.1 | TatD family hydrolase | - |
| D9C16_RS13530 (D9C16_13530) | metG | 2482196..2484190 (-) | 1995 | WP_014478594.1 | methionine--tRNA ligase | - |
| D9C16_RS13535 (D9C16_13535) | abrB | 2484685..2484975 (+) | 291 | WP_003226760.1 | transition state genes transcriptional regulator AbrB | Regulator |
| D9C16_RS13540 (D9C16_13540) | rsmI | 2485024..2485902 (-) | 879 | WP_003243457.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| D9C16_RS13545 (D9C16_13545) | yazA | 2485877..2486176 (-) | 300 | WP_003242983.1 | GIY-YIG nuclease family protein | - |
| D9C16_RS13550 (D9C16_13550) | trmNF | 2486163..2486906 (-) | 744 | WP_003244526.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| D9C16_RS13555 (D9C16_13555) | yabA | 2486965..2487324 (-) | 360 | WP_003218308.1 | replication initiation-control protein YabA | - |
| D9C16_RS13560 (D9C16_13560) | ricT | 2487339..2488166 (-) | 828 | WP_003226767.1 | competence/sporulation regulator complex protein RicT | - |
| D9C16_RS13565 (D9C16_13565) | holB | 2488169..2489158 (-) | 990 | WP_003226770.1 | DNA polymerase III subunit delta' | - |
| D9C16_RS13570 (D9C16_13570) | yaaR | 2489170..2489610 (-) | 441 | WP_009966249.1 | YaaR family protein | - |
| D9C16_RS13575 (D9C16_13575) | darA | 2489623..2489952 (-) | 330 | WP_003242755.1 | cyclic di-AMP receptor DarA | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10772.62 Da Isoelectric Point: 6.3482
>NTDB_id=319578 D9C16_RS13535 WP_003226760.1 2484685..2484975(+) (abrB) [Bacillus subtilis subsp. subtilis strain N1-1]
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
Nucleotide
Download Length: 291 bp
>NTDB_id=319578 D9C16_RS13535 WP_003226760.1 2484685..2484975(+) (abrB) [Bacillus subtilis subsp. subtilis strain N1-1]
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |