Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrC   Type   Regulator
Locus tag   D9C16_RS11600 Genome accession   NZ_CP032861
Coordinates   2103058..2103180 (-) Length   40 a.a.
NCBI ID   WP_003224994.1    Uniprot ID   G4NQY6
Organism   Bacillus subtilis subsp. subtilis strain N1-1     
Function   antagonize RapC (predicted from homology)   
Competence regulation

Genomic Context

Location: 2098058..2108180
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D9C16_RS11570 (D9C16_11570) yclP 2098125..2098883 (-) 759 WP_014475806.1 petrobactin ABC transporter ATP-binding protein YclP -
  D9C16_RS11575 (D9C16_11575) yclO 2098877..2099824 (-) 948 WP_014475805.1 petrobactin ABC transporter permease YclO -
  D9C16_RS11580 (D9C16_11580) ceuB 2099817..2100767 (-) 951 WP_014475804.1 petrobactin ABC transporter permease YclN Machinery gene
  D9C16_RS11585 (D9C16_11585) thrD 2101158..2102522 (+) 1365 WP_014478832.1 aspartate kinase -
  D9C16_RS11590 (D9C16_11590) yczN 2102675..2102788 (+) 114 WP_014478831.1 YjcZ family sporulation protein -
  D9C16_RS11595 (D9C16_11595) yczM 2102870..2102959 (+) 90 WP_015482794.1 YjcZ family sporulation protein -
  D9C16_RS11600 (D9C16_11600) phrC 2103058..2103180 (-) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  D9C16_RS11605 (D9C16_11605) rapC 2103164..2104312 (-) 1149 WP_014475800.1 response regulator aspartate phosphatase RapC Regulator
  D9C16_RS11610 (D9C16_11610) yclK 2104475..2105896 (-) 1422 WP_072173981.1 two-component system sensor histidine kinase YclK -
  D9C16_RS11615 (D9C16_11615) yclJ 2105883..2106566 (-) 684 WP_003246532.1 two-component system response regulator YclJ -

Sequence

Protein


Download         Length: 40 a.a.        Molecular weight: 4197.98 Da        Isoelectric Point: 8.0285

>NTDB_id=319571 D9C16_RS11600 WP_003224994.1 2103058..2103180(-) (phrC) [Bacillus subtilis subsp. subtilis strain N1-1]
MKLKSKLFVICLAAAAIFTAAGVSANAEALDFHVTERGMT

Nucleotide


Download         Length: 123 bp        

>NTDB_id=319571 D9C16_RS11600 WP_003224994.1 2103058..2103180(-) (phrC) [Bacillus subtilis subsp. subtilis strain N1-1]
ATGAAATTGAAATCTAAGTTGTTTGTTATTTGTTTGGCCGCAGCCGCGATTTTTACAGCGGCTGGCGTTTCTGCTAATGC
GGAAGCACTCGACTTTCATGTGACAGAAAGAGGAATGACGTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-40)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NQY6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrC Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment