Detailed information NTG0319551

Bioinformatically predicted

Overview

• Name: abrB
• Type: Regulator
• Locus tag: D9C16_RS05660
• Genome accession: NZ_CP032861
• Coordinates: 1003970..1004248 (-)
• Length: 92 a.a.
• NCBI ID: WP_003244728.1
• Uniprot ID: A0A199WGU6
• Organism: Bacillus subtilis subsp. subtilis strain N1-1
• Function: repression of comK; repression of rok (predicted from homology) Competence regulation

Genomic Context

Location: 998970..1009248

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D9C16_RS05640 (D9C16_05640)	ade	999032..1000765 (-)	1734	WP_014479688.1	adenine deaminase	-
D9C16_RS05645 (D9C16_05645)	ktrC	1000920..1001585 (-)	666	WP_003222311.1	Ktr system potassium transporter KtrC	-
D9C16_RS05650 (D9C16_05650)	ykqA	1001648..1002481 (-)	834	WP_014479687.1	gamma-glutamylcyclotransferase	-
D9C16_RS05655 (D9C16_05655)	kinC	1002497..1003780 (-)	1284	WP_014479686.1	two-component sensor histidine kinase KinC	-
D9C16_RS05660 (D9C16_05660)	abrB	1003970..1004248 (-)	279	WP_003244728.1	transcriptional regulator AbhA	Regulator
D9C16_RS05665 (D9C16_05665)	mreBH	1004532..1005539 (+)	1008	WP_003245743.1	cell shape-determining protein MreBH	-
D9C16_RS05670 (D9C16_05670)	ykpC	1005640..1005774 (+)	135	WP_003238865.1	protein YkpC	-
D9C16_RS05675 (D9C16_05675)	ampS	1005883..1007115 (+)	1233	WP_003232341.1	aminopeptidase	-
D9C16_RS05680 (D9C16_05680)	panEB	1007149..1008060 (-)	912	WP_014479685.1	ketopantoate reductase family protein	-

Sequence

Protein

• Length: 92 a.a.
• Molecular weight: 10256.07 Da
• Isoelectric Point: 5.8808

>NTDB_id=319551 D9C16_RS05660 WP_003244728.1 1003970..1004248(-) (abrB) [Bacillus subtilis subsp. subtilis strain N1-1]
MKSIGVVRKVDELGRIVMPIELRRALDIAIKDSIEFFVDGDKIILKKYKPHGVCLMTGEITSENKEYGNGKITLSPEGAQ
LLLEEIQAALKE

Nucleotide

• Length: 279 bp

>NTDB_id=319551 D9C16_RS05660 WP_003244728.1 1003970..1004248(-) (abrB) [Bacillus subtilis subsp. subtilis strain N1-1]
ATGAAATCAATAGGTGTTGTGAGAAAAGTAGATGAATTAGGCCGCATTGTCATGCCGATTGAGTTGAGACGGGCATTGGA
TATTGCCATAAAAGACAGCATTGAGTTTTTTGTTGACGGAGATAAAATTATCTTGAAAAAGTACAAACCTCATGGCGTTT
GTTTAATGACTGGAGAAATCACTTCAGAAAATAAAGAATACGGCAACGGTAAAATTACGCTAAGCCCTGAGGGTGCACAG
CTGCTTCTCGAAGAAATTCAAGCCGCTTTAAAAGAATAA

Domains

Predicted by InterproScan.

• AbrB C-terminal domain (AbrB_C) (53-88)

• Antidote-toxin recognition MazE, bacterial antitoxin (MazE_antitoxin) (8-51)

3D structure

• AlphaFold DB: A0A199WGU6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
abrB	Bacillus subtilis subsp. subtilis str. 168	58.242	98.913	0.576