Detailed information NTG0319508

Bioinformatically predicted

Overview

• Name: abrB
• Type: Regulator
• Locus tag: D9C14_RS15880
• Genome accession: NZ_CP032860
• Coordinates: 3027233..3027511 (+)
• Length: 92 a.a.
• NCBI ID: WP_003244728.1
• Uniprot ID: A0A199WGU6
• Organism: Bacillus subtilis subsp. subtilis strain SSJ-1
• Function: repression of comK; repression of rok (predicted from homology) Competence regulation

Genomic Context

Location: 3022233..3032511

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D9C14_RS15860 (D9C14_15860)	panEB	3023421..3024332 (+)	912	WP_038427635.1	ketopantoate reductase family protein	-
D9C14_RS15865 (D9C14_15865)	ampS	3024366..3025598 (-)	1233	WP_003232341.1	aminopeptidase	-
D9C14_RS15870 (D9C14_15870)	ykpC	3025707..3025841 (-)	135	WP_003238865.1	protein YkpC	-
D9C14_RS15875 (D9C14_15875)	mreBH	3025942..3026949 (-)	1008	WP_029727190.1	cell shape-determining protein MreBH	-
D9C14_RS15880 (D9C14_15880)	abrB	3027233..3027511 (+)	279	WP_003244728.1	transcriptional regulator AbhA	Regulator
D9C14_RS15885 (D9C14_15885)	kinC	3027701..3028987 (+)	1287	WP_121572568.1	two-component sensor histidine kinase KinC	-
D9C14_RS15890 (D9C14_15890)	ykqA	3029003..3029830 (+)	828	WP_003232330.1	gamma-glutamylcyclotransferase	-
D9C14_RS15895 (D9C14_15895)	ktrC	3029893..3030558 (+)	666	WP_003222311.1	Ktr system potassium transporter KtrC	-
D9C14_RS15900 (D9C14_15900)	ade	3030714..3032447 (+)	1734	WP_032721495.1	adenine deaminase	-

Sequence

Protein

• Length: 92 a.a.
• Molecular weight: 10256.07 Da
• Isoelectric Point: 5.8808

>NTDB_id=319508 D9C14_RS15880 WP_003244728.1 3027233..3027511(+) (abrB) [Bacillus subtilis subsp. subtilis strain SSJ-1]
MKSIGVVRKVDELGRIVMPIELRRALDIAIKDSIEFFVDGDKIILKKYKPHGVCLMTGEITSENKEYGNGKITLSPEGAQ
LLLEEIQAALKE

Nucleotide

• Length: 279 bp

>NTDB_id=319508 D9C14_RS15880 WP_003244728.1 3027233..3027511(+) (abrB) [Bacillus subtilis subsp. subtilis strain SSJ-1]
ATGAAATCAATAGGTGTTGTGAGAAAAGTAGATGAATTAGGCCGCATTGTCATGCCGATTGAGTTGAGACGGGCATTGGA
TATTGCCATAAAAGACAGCATTGAGTTTTTTGTTGACGGAGATAAAATTATCTTGAAAAAGTACAAACCTCATGGCGTTT
GTTTAATGACTGGAGAAATCACTTCAGAAAATAAAGAATACGGCAACGGTAAAATTACGCTAAGCCCTGAGGGTGCACAG
CTGCTTCTCGAAGAAATTCAAGCCGCTTTAAAAGAATAA

Domains

Predicted by InterproScan.

• AbrB C-terminal domain (AbrB_C) (53-88)

• Antidote-toxin recognition MazE, bacterial antitoxin (MazE_antitoxin) (8-51)

3D structure

• AlphaFold DB: A0A199WGU6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
abrB	Bacillus subtilis subsp. subtilis str. 168	58.242	98.913	0.576