Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   D9C14_RS15760 Genome accession   NZ_CP032860
Coordinates   3003153..3003728 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain SSJ-1     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 2998153..3008728
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D9C14_RS15730 (D9C14_15730) dapD 2998340..2999050 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  D9C14_RS15735 (D9C14_15735) dapI 2999120..3000244 (+) 1125 WP_021479383.1 N-acetyldiaminopimelate deacetylase -
  D9C14_RS15740 (D9C14_15740) ykuS 3000306..3000551 (+) 246 WP_003232382.1 YkuS family protein -
  D9C14_RS15745 (D9C14_15745) mscT 3000588..3001391 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  D9C14_RS15750 (D9C14_15750) ahpA 3001628..3002170 (+) 543 WP_038427629.1 biofilm-specific peroxidase AhpA -
  D9C14_RS15755 (D9C14_15755) ykuV 3002241..3002687 (+) 447 WP_015252187.1 thiol-disulfide oxidoreductase YkuV -
  D9C14_RS15760 (D9C14_15760) rok 3003153..3003728 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  D9C14_RS15765 (D9C14_15765) cse15 3003769..3004734 (-) 966 WP_038427630.1 spore protein Cse15 -
  D9C14_RS15770 (D9C14_15770) mobA 3004871..3005470 (+) 600 WP_021479380.1 molybdenum cofactor guanylyltransferase -
  D9C14_RS15775 (D9C14_15775) moeB 3005521..3006540 (+) 1020 WP_017696813.1 molybdopterin-synthase adenylyltransferase MoeB -
  D9C14_RS15780 (D9C14_15780) glp 3006558..3007850 (+) 1293 WP_038427631.1 gephyrin-like molybdotransferase Glp -
  D9C14_RS15785 (D9C14_15785) mobB 3007811..3008332 (+) 522 WP_029725925.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=319507 D9C14_RS15760 WP_003232378.1 3003153..3003728(+) (rok) [Bacillus subtilis subsp. subtilis strain SSJ-1]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=319507 D9C14_RS15760 WP_003232378.1 3003153..3003728(+) (rok) [Bacillus subtilis subsp. subtilis strain SSJ-1]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTCCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment