Detailed information    

insolico Bioinformatically predicted

Overview


Name   comZ   Type   Regulator
Locus tag   D9C14_RS14145 Genome accession   NZ_CP032860
Coordinates   2716673..2716864 (+) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus subtilis subsp. subtilis strain SSJ-1     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context


Location: 2711673..2721864
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D9C14_RS14115 (D9C14_14115) argF 2712537..2713496 (+) 960 WP_003232980.1 ornithine carbamoyltransferase -
  D9C14_RS14120 (D9C14_14120) yjzC 2713582..2713761 (+) 180 WP_003245356.1 YjzC family protein -
  D9C14_RS14125 (D9C14_14125) yjzD 2713807..2713992 (-) 186 WP_003245236.1 DUF2929 domain-containing protein -
  D9C14_RS14130 (D9C14_14130) - 2714241..2714975 (+) 735 WP_003245223.1 hypothetical protein -
  D9C14_RS14135 (D9C14_14135) - 2715057..2715614 (+) 558 WP_003232974.1 hypothetical protein -
  D9C14_RS14140 (D9C14_14140) med 2715705..2716658 (+) 954 WP_003245494.1 transcriptional regulator Med Regulator
  D9C14_RS14145 (D9C14_14145) comZ 2716673..2716864 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  D9C14_RS14150 (D9C14_14150) yjzB 2716894..2717133 (-) 240 WP_003232972.1 spore coat protein YjzB -
  D9C14_RS14155 (D9C14_14155) fabH 2717298..2718236 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  D9C14_RS14160 (D9C14_14160) fabF 2718259..2719500 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  D9C14_RS14165 (D9C14_14165) yjaZ 2719576..2720361 (+) 786 WP_003232967.1 DUF2268 domain-containing protein -
  D9C14_RS14170 (D9C14_14170) appD 2720553..2721539 (+) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence


Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=319498 D9C14_RS14145 WP_003224559.1 2716673..2716864(+) (comZ) [Bacillus subtilis subsp. subtilis strain SSJ-1]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=319498 D9C14_RS14145 WP_003224559.1 2716673..2716864(+) (comZ) [Bacillus subtilis subsp. subtilis strain SSJ-1]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains


Predicted by InterproScan.

(4-58)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment