Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | D9C14_RS08385 | Genome accession | NZ_CP032860 |
| Coordinates | 1600576..1600866 (-) | Length | 96 a.a. |
| NCBI ID | WP_003226760.1 | Uniprot ID | A0A7G9PCZ4 |
| Organism | Bacillus subtilis subsp. subtilis strain SSJ-1 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1595576..1605866
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D9C14_RS08345 (D9C14_08345) | darA | 1595599..1595928 (+) | 330 | WP_003242755.1 | cyclic di-AMP receptor DarA | - |
| D9C14_RS08350 (D9C14_08350) | yaaR | 1595941..1596381 (+) | 441 | WP_009966249.1 | YaaR family protein | - |
| D9C14_RS08355 (D9C14_08355) | holB | 1596393..1597382 (+) | 990 | WP_003244417.1 | DNA polymerase III subunit delta' | - |
| D9C14_RS08360 (D9C14_08360) | ricT | 1597385..1598212 (+) | 828 | WP_003243571.1 | competence/sporulation regulator complex protein RicT | - |
| D9C14_RS08365 (D9C14_08365) | yabA | 1598227..1598586 (+) | 360 | WP_003218308.1 | replication initiation-control protein YabA | - |
| D9C14_RS08370 (D9C14_08370) | trmNF | 1598645..1599388 (+) | 744 | WP_003244526.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| D9C14_RS08375 (D9C14_08375) | yazA | 1599375..1599674 (+) | 300 | WP_003242983.1 | GIY-YIG nuclease family protein | - |
| D9C14_RS08380 (D9C14_08380) | rsmI | 1599649..1600527 (+) | 879 | WP_019712967.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| D9C14_RS08385 (D9C14_08385) | abrB | 1600576..1600866 (-) | 291 | WP_003226760.1 | transition state genes transcriptional regulator AbrB | Regulator |
| D9C14_RS08390 (D9C14_08390) | metG | 1601361..1603355 (+) | 1995 | WP_121572515.1 | methionine--tRNA ligase | - |
| D9C14_RS08395 (D9C14_08395) | dayD | 1603435..1604202 (+) | 768 | WP_029726393.1 | TatD family hydrolase | - |
| D9C14_RS08400 (D9C14_08400) | yabE | 1604358..1605671 (+) | 1314 | WP_029726392.1 | ubiquitin-like domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10772.62 Da Isoelectric Point: 6.3482
>NTDB_id=319479 D9C14_RS08385 WP_003226760.1 1600576..1600866(-) (abrB) [Bacillus subtilis subsp. subtilis strain SSJ-1]
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
Nucleotide
Download Length: 291 bp
>NTDB_id=319479 D9C14_RS08385 WP_003226760.1 1600576..1600866(-) (abrB) [Bacillus subtilis subsp. subtilis strain SSJ-1]
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |