Detailed information NTG0319477

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: D9C14_RS08155
• Genome accession: NZ_CP032860
• Coordinates: 1559242..1560354 (+)
• Length: 370 a.a.
• NCBI ID: WP_003226809.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. subtilis strain SSJ-1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1554242..1565354

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D9C14_RS08130 (D9C14_08130)	rnpA	1554952..1555302 (-)	351	WP_003242628.1	ribonuclease P protein component	-
D9C14_RS08135 (D9C14_08135)	rpmH	1555454..1555588 (-)	135	WP_003178075.1	50S ribosomal protein L34	-
D9C14_RS08140 (D9C14_08140)	dnaA	1556215..1557555 (+)	1341	WP_003242674.1	chromosomal replication initiator protein DnaA	-
D9C14_RS08145 (D9C14_08145)	dnaN	1557744..1558880 (+)	1137	WP_003226811.1	DNA polymerase III subunit beta	-
D9C14_RS08150 (D9C14_08150)	rlbA	1559011..1559226 (+)	216	WP_003226810.1	ribosome maturation protein RlbA	-
D9C14_RS08155 (D9C14_08155)	recF	1559242..1560354 (+)	1113	WP_003226809.1	DNA replication/repair protein RecF	Machinery gene
D9C14_RS08160 (D9C14_08160)	remB	1560372..1560617 (+)	246	WP_003219266.1	extracellular matrix regulator RemB	-
D9C14_RS08165 (D9C14_08165)	gyrB	1560672..1562588 (+)	1917	WP_003226808.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	-
D9C14_RS08170 (D9C14_08170)	gyrA	1562799..1565264 (+)	2466	WP_014475555.1	DNA topoisomerase (ATP-hydrolyzing) subunit A	-

Sequence

Protein

• Length: 370 a.a.
• Molecular weight: 42318.37 Da
• Isoelectric Point: 7.3661

>NTDB_id=319477 D9C14_RS08155 WP_003226809.1 1559242..1560354(+) (recF) [Bacillus subtilis subsp. subtilis strain SSJ-1]
MYIQNLELTSYRNYDHAELQFENKVNVIIGENAQGKTNLMEAIYVLSMAKSHRTSNDKELIRWDKDYAKIEGRVMKQNGA
IPMQLVISKKGKKGKVNHIEQQKLSQYVGALNTIMFAPEDLNLVKGSPQVRRRFLDMEIGQVSPVYLHDLSLYQKILSQR
NHFLKQLQTRKQTDRTMLDVLTDQLVEVAAKVVVKRLQFTAQLEKWAQPIHAGISRGLEELTLKYHTALEVSDPLDLSKI
GDSYQEAFSKLREKEIERGVTLSGPHRDDVLFYVNGRDVQTYGSQGQQRTTALSLKLAEIDLIHEEIGEYPILLLDDVLS
ELDDYRQSHLLHTIQGRVQTFVTTTSVDGIDHETLRQAGMFRVQNGALVK

Nucleotide

• Length: 1113 bp

>NTDB_id=319477 D9C14_RS08155 WP_003226809.1 1559242..1560354(+) (recF) [Bacillus subtilis subsp. subtilis strain SSJ-1]
TTGTATATCCAGAACTTAGAACTGACATCTTACCGCAACTACGACCATGCTGAACTTCAATTTGAAAATAAAGTAAATGT
GATCATCGGAGAAAACGCCCAGGGGAAGACAAACCTCATGGAGGCGATCTATGTCTTGTCCATGGCGAAATCGCACCGGA
CATCAAATGACAAAGAACTTATACGGTGGGACAAAGACTATGCTAAAATAGAGGGAAGAGTGATGAAGCAAAACGGGGCG
ATCCCGATGCAGCTCGTCATCTCCAAAAAGGGTAAAAAGGGCAAGGTCAATCATATTGAACAGCAAAAGCTCAGCCAGTA
TGTCGGGGCCCTCAACACCATTATGTTCGCGCCGGAAGATTTAAATCTTGTAAAGGGAAGCCCTCAAGTGAGAAGGCGGT
TTCTTGACATGGAAATCGGACAGGTTTCTCCCGTCTACCTTCATGATCTTTCTCTTTACCAGAAAATCCTTTCCCAGCGG
AATCATTTTTTGAAACAGCTGCAAACAAGAAAACAAACTGACCGGACGATGCTCGATGTTCTGACCGATCAGCTTGTAGA
AGTTGCAGCAAAAGTCGTCGTAAAACGCCTGCAGTTTACAGCACAGCTCGAGAAATGGGCGCAGCCCATCCATGCAGGCA
TTTCAAGAGGGCTTGAAGAACTGACCCTGAAATACCATACAGCTCTTGAGGTATCAGATCCCCTAGATTTGTCGAAAATA
GGAGATAGCTATCAAGAAGCGTTTTCTAAATTAAGAGAAAAAGAAATTGAGCGTGGTGTGACGCTGTCAGGGCCACATCG
CGATGATGTTCTTTTCTATGTGAACGGACGCGATGTGCAGACGTATGGTTCTCAAGGACAGCAGCGAACGACGGCGTTGT
CCCTTAAGCTGGCGGAGATTGACCTGATCCATGAAGAAATCGGAGAATATCCCATTTTACTATTGGATGATGTACTGAGT
GAACTGGATGATTATCGCCAGTCACACTTGCTTCATACGATCCAAGGCCGTGTACAAACGTTTGTCACAACGACAAGCGT
TGATGGCATTGATCACGAAACCTTACGTCAAGCAGGAATGTTCCGTGTGCAAAATGGTGCGTTAGTGAAGTGA

Domains

Predicted by InterproScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (2-350)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Bacillus subtilis subsp. subtilis str. 168	99.73	100	0.997