Detailed information
Bioinformatically predicted
Overview
| Name | nucA/comI | Type | Machinery gene |
| Locus tag | D9C12_RS15215 | Genome accession | NZ_CP032857 |
| Coordinates | 2821834..2822244 (-) | Length | 136 a.a. |
| NCBI ID | WP_009967785.1 | Uniprot ID | A0A6I4D881 |
| Organism | Bacillus subtilis subsp. subtilis strain 2RL2-3 | ||
| Function | cleavage of dsDNA into ssDNA (predicted from homology) DNA processing |
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Genomic Context
Location: 2816834..2827244
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D9C12_RS15185 (D9C12_15185) | - | 2816922..2817062 (+) | 141 | WP_003226124.1 | sporulation histidine kinase inhibitor Sda | - |
| D9C12_RS15190 (D9C12_15190) | yqeF | 2817368..2818099 (-) | 732 | WP_003229964.1 | SGNH/GDSL hydrolase family protein | - |
| D9C12_RS15195 (D9C12_15195) | cwlH | 2818351..2819103 (-) | 753 | WP_069837642.1 | N-acetylmuramoyl-L-alanine amidase CwlH | - |
| D9C12_RS15200 (D9C12_15200) | yqeD | 2819290..2819916 (+) | 627 | WP_014480319.1 | TVP38/TMEM64 family protein | - |
| D9C12_RS15205 (D9C12_15205) | gnd | 2819935..2820828 (-) | 894 | WP_069837643.1 | phosphogluconate dehydrogenase (NAD(+)-dependent, decarboxylating) | - |
| D9C12_RS15210 (D9C12_15210) | yqeB | 2821079..2821801 (+) | 723 | WP_014480321.1 | hypothetical protein | - |
| D9C12_RS15215 (D9C12_15215) | nucA/comI | 2821834..2822244 (-) | 411 | WP_009967785.1 | sporulation-specific Dnase NucB | Machinery gene |
| D9C12_RS15220 (D9C12_15220) | sigK | 2822440..2823168 (+) | 729 | WP_013308023.1 | RNA polymerase sporulation sigma factor SigK | - |
| D9C12_RS15225 (D9C12_15225) | - | 2823168..2823266 (+) | 99 | WP_031600702.1 | hypothetical protein | - |
| D9C12_RS23860 | - | 2823263..2823475 (-) | 213 | Protein_2930 | recombinase family protein | - |
| D9C12_RS15235 (D9C12_15235) | fumC | 2823694..2825082 (-) | 1389 | WP_014480325.1 | class II fumarate hydratase | - |
| D9C12_RS15240 (D9C12_15240) | - | 2825249..2826139 (+) | 891 | WP_014480326.1 | LysR family transcriptional regulator | - |
Sequence
Protein
Download Length: 136 a.a. Molecular weight: 14967.97 Da Isoelectric Point: 5.1853
>NTDB_id=319427 D9C12_RS15215 WP_009967785.1 2821834..2822244(-) (nucA/comI) [Bacillus subtilis subsp. subtilis strain 2RL2-3]
MKKWMAGLFLAAAVLLCLMVPQQIQGASSYDKVLYFPLSRYPETGSHIRDAIAEGHPDICTIDRDGADKRREESLKGIPT
KPGYDRDEWPMAVCEEGGAGADVRYVTPSDNRGAGSWVGNQMSSYPDGTRVLFIVQ
MKKWMAGLFLAAAVLLCLMVPQQIQGASSYDKVLYFPLSRYPETGSHIRDAIAEGHPDICTIDRDGADKRREESLKGIPT
KPGYDRDEWPMAVCEEGGAGADVRYVTPSDNRGAGSWVGNQMSSYPDGTRVLFIVQ
Nucleotide
Download Length: 411 bp
>NTDB_id=319427 D9C12_RS15215 WP_009967785.1 2821834..2822244(-) (nucA/comI) [Bacillus subtilis subsp. subtilis strain 2RL2-3]
ATGAAAAAATGGATGGCAGGCCTGTTTCTTGCTGCAGCAGTTCTTCTTTGTTTAATGGTTCCGCAACAGATCCAAGGCGC
ATCTTCGTATGACAAAGTGTTATATTTTCCGCTGTCTCGTTATCCGGAAACCGGCAGTCATATTAGAGATGCGATTGCAG
AGGGACATCCAGATATTTGTACCATTGACAGAGATGGAGCAGACAAAAGGCGGGAGGAATCTTTAAAGGGAATCCCGACC
AAGCCGGGCTATGACCGGGATGAGTGGCCGATGGCGGTCTGCGAGGAAGGCGGCGCAGGGGCTGATGTCCGATATGTGAC
GCCTTCTGATAATCGCGGCGCCGGCTCGTGGGTAGGGAATCAAATGAGCAGCTATCCTGACGGCACCAGAGTGCTGTTTA
TTGTGCAGTAG
ATGAAAAAATGGATGGCAGGCCTGTTTCTTGCTGCAGCAGTTCTTCTTTGTTTAATGGTTCCGCAACAGATCCAAGGCGC
ATCTTCGTATGACAAAGTGTTATATTTTCCGCTGTCTCGTTATCCGGAAACCGGCAGTCATATTAGAGATGCGATTGCAG
AGGGACATCCAGATATTTGTACCATTGACAGAGATGGAGCAGACAAAAGGCGGGAGGAATCTTTAAAGGGAATCCCGACC
AAGCCGGGCTATGACCGGGATGAGTGGCCGATGGCGGTCTGCGAGGAAGGCGGCGCAGGGGCTGATGTCCGATATGTGAC
GCCTTCTGATAATCGCGGCGCCGGCTCGTGGGTAGGGAATCAAATGAGCAGCTATCCTGACGGCACCAGAGTGCTGTTTA
TTGTGCAGTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nucA/comI | Bacillus subtilis subsp. subtilis str. 168 |
62.609 |
84.559 |
0.529 |