Detailed information NTG0319406

Bioinformatically predicted

Overview

• Name: abrB
• Type: Regulator
• Locus tag: D9C12_RS09775
• Genome accession: NZ_CP032857
• Coordinates: 1852985..1853263 (+)
• Length: 92 a.a.
• NCBI ID: WP_003244728.1
• Uniprot ID: A0A199WGU6
• Organism: Bacillus subtilis subsp. subtilis strain 2RL2-3
• Function: repression of comK; repression of rok (predicted from homology) Competence regulation

Genomic Context

Location: 1847985..1858263

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D9C12_RS09755 (D9C12_09755)	-	1848635..1849987 (-)	1353	WP_014478984.1	IS1182 family transposase	-
D9C12_RS09760 (D9C12_09760)	ampS	1850117..1851349 (-)	1233	WP_003232341.1	aminopeptidase	-
D9C12_RS09765 (D9C12_09765)	ykpC	1851459..1851593 (-)	135	WP_003238865.1	protein YkpC	-
D9C12_RS09770 (D9C12_09770)	mreBH	1851694..1852701 (-)	1008	WP_026113694.1	cell shape-determining protein MreBH	-
D9C12_RS09775 (D9C12_09775)	abrB	1852985..1853263 (+)	279	WP_003244728.1	transcriptional regulator AbhA	Regulator
D9C12_RS09785 (D9C12_09785)	-	1853669..1854793 (+)	1125	WP_014478926.1	IS4-like element IS4Bsu1 family transposase	-
D9C12_RS09790 (D9C12_09790)	kinC	1854940..1856154 (+)	1215	Protein_1856	two-component sensor histidine kinase KinC	-
D9C12_RS09795 (D9C12_09795)	ykqA	1856170..1857003 (+)	834	WP_014479687.1	gamma-glutamylcyclotransferase	-
D9C12_RS09800 (D9C12_09800)	ktrC	1857066..1857731 (+)	666	WP_003222311.1	Ktr system potassium transporter KtrC	-

Sequence

Protein

• Length: 92 a.a.
• Molecular weight: 10256.07 Da
• Isoelectric Point: 5.8808

>NTDB_id=319406 D9C12_RS09775 WP_003244728.1 1852985..1853263(+) (abrB) [Bacillus subtilis subsp. subtilis strain 2RL2-3]
MKSIGVVRKVDELGRIVMPIELRRALDIAIKDSIEFFVDGDKIILKKYKPHGVCLMTGEITSENKEYGNGKITLSPEGAQ
LLLEEIQAALKE

Nucleotide

• Length: 279 bp

>NTDB_id=319406 D9C12_RS09775 WP_003244728.1 1852985..1853263(+) (abrB) [Bacillus subtilis subsp. subtilis strain 2RL2-3]
ATGAAATCAATAGGTGTTGTGAGAAAAGTAGATGAATTAGGCCGCATTGTCATGCCGATTGAGTTGAGACGGGCATTGGA
TATTGCCATAAAAGACAGCATTGAGTTTTTTGTTGACGGAGATAAAATTATCTTGAAAAAGTACAAACCTCATGGCGTTT
GTTTAATGACTGGAGAAATCACTTCAGAAAATAAAGAATACGGCAACGGTAAAATTACGCTAAGCCCTGAGGGTGCACAG
CTGCTTCTCGAAGAAATTCAAGCCGCTTTAAAAGAATAA

Domains

Predicted by InterproScan.

• AbrB C-terminal domain (AbrB_C) (53-88)

• Antidote-toxin recognition MazE, bacterial antitoxin (MazE_antitoxin) (8-51)

3D structure

• AlphaFold DB: A0A199WGU6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
abrB	Bacillus subtilis subsp. subtilis str. 168	58.242	98.913	0.576