Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | D9C12_RS01590 | Genome accession | NZ_CP032857 |
| Coordinates | 301717..302007 (-) | Length | 96 a.a. |
| NCBI ID | WP_003226760.1 | Uniprot ID | A0A7G9PCZ4 |
| Organism | Bacillus subtilis subsp. subtilis strain 2RL2-3 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 296717..307007
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D9C12_RS01550 (D9C12_01550) | darA | 296740..297069 (+) | 330 | WP_003242755.1 | cyclic di-AMP receptor DarA | - |
| D9C12_RS01555 (D9C12_01555) | yaaR | 297082..297522 (+) | 441 | WP_009966249.1 | YaaR family protein | - |
| D9C12_RS01560 (D9C12_01560) | holB | 297534..298523 (+) | 990 | WP_003226770.1 | DNA polymerase III subunit delta' | - |
| D9C12_RS01565 (D9C12_01565) | ricT | 298526..299353 (+) | 828 | WP_003226767.1 | competence/sporulation regulator complex protein RicT | - |
| D9C12_RS01570 (D9C12_01570) | yabA | 299368..299727 (+) | 360 | WP_003218308.1 | replication initiation-control protein YabA | - |
| D9C12_RS01575 (D9C12_01575) | trmNF | 299786..300529 (+) | 744 | WP_041338388.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| D9C12_RS01580 (D9C12_01580) | yazA | 300516..300815 (+) | 300 | WP_069837179.1 | GIY-YIG nuclease family protein | - |
| D9C12_RS01585 (D9C12_01585) | rsmI | 300790..301668 (+) | 879 | WP_019712967.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| D9C12_RS01590 (D9C12_01590) | abrB | 301717..302007 (-) | 291 | WP_003226760.1 | transition state genes transcriptional regulator AbrB | Regulator |
| D9C12_RS01595 (D9C12_01595) | metG | 302502..304496 (+) | 1995 | WP_014478594.1 | methionine--tRNA ligase | - |
| D9C12_RS01600 (D9C12_01600) | dayD | 304576..305343 (+) | 768 | WP_014478595.1 | TatD family hydrolase | - |
| D9C12_RS01605 (D9C12_01605) | yabE | 305499..306812 (+) | 1314 | WP_029726392.1 | ubiquitin-like domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10772.62 Da Isoelectric Point: 6.3482
>NTDB_id=319378 D9C12_RS01590 WP_003226760.1 301717..302007(-) (abrB) [Bacillus subtilis subsp. subtilis strain 2RL2-3]
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
Nucleotide
Download Length: 291 bp
>NTDB_id=319378 D9C12_RS01590 WP_003226760.1 301717..302007(-) (abrB) [Bacillus subtilis subsp. subtilis strain 2RL2-3]
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |