Detailed information    

insolico Bioinformatically predicted

Overview


Name   recX   Type   Regulator
Locus tag   D9C11_RS15995 Genome accession   NZ_CP032855
Coordinates   3005209..3006003 (+) Length   264 a.a.
NCBI ID   WP_121591552.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain PJ-7     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context


Location: 3000209..3011003
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D9C11_RS15965 (D9C11_15965) sxzA 3001048..3002079 (+) 1032 WP_043857890.1 iron ABC transporter permease -
  D9C11_RS15970 (D9C11_15970) yfhB 3002194..3003075 (+) 882 WP_121591549.1 PhzF family phenazine biosynthesis isomerase -
  D9C11_RS15975 (D9C11_15975) yfhC 3003163..3003747 (+) 585 WP_121591550.1 nitroreductase -
  D9C11_RS15980 (D9C11_15980) yfhD 3003786..3003977 (-) 192 WP_003233561.1 YfhD family protein -
  D9C11_RS15985 (D9C11_15985) yfhE 3004044..3004154 (-) 111 WP_003223230.1 YfhE family protein -
  D9C11_RS15990 (D9C11_15990) yfhF 3004209..3005120 (-) 912 WP_121591551.1 TIGR01777 family oxidoreductase -
  D9C11_RS15995 (D9C11_15995) recX 3005209..3006003 (+) 795 WP_121591552.1 recombination regulator RecX Regulator
  D9C11_RS16000 (D9C11_16000) yfhH 3006005..3006319 (+) 315 WP_003244592.1 YfhH family protein -
  D9C11_RS16005 (D9C11_16005) yfhI 3006463..3007656 (+) 1194 WP_003243500.1 MFS transporter -
  D9C11_RS16010 (D9C11_16010) sspK 3007688..3007840 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  D9C11_RS16015 (D9C11_16015) yfhJ 3007965..3008234 (+) 270 WP_003243789.1 YfhJ family protein -
  D9C11_RS16020 (D9C11_16020) yfhK 3008379..3008900 (+) 522 WP_121591553.1 SH3 domain-containing protein -
  D9C11_RS16025 (D9C11_16025) spdL 3008985..3009317 (+) 333 WP_024573182.1 SdpC immunity protein SpdL -
  D9C11_RS16030 (D9C11_16030) ephM 3009304..3010164 (+) 861 WP_014479220.1 epoxide hydrolase EphM -

Sequence


Protein


Download         Length: 264 a.a.        Molecular weight: 30964.16 Da        Isoelectric Point: 6.6687

>NTDB_id=319349 D9C11_RS15995 WP_121591552.1 3005209..3006003(+) (recX) [Bacillus subtilis subsp. subtilis strain PJ-7]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEN

Nucleotide


Download         Length: 795 bp        

>NTDB_id=319349 D9C11_RS15995 WP_121591552.1 3005209..3006003(+) (recX) [Bacillus subtilis subsp. subtilis strain PJ-7]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAACATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGAACTGA

Domains


Predicted by InterproScan.

(84-204)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

100

99.621

0.996


Multiple sequence alignment