Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | D9C11_RS02070 | Genome accession | NZ_CP032855 |
| Coordinates | 348123..349160 (-) | Length | 345 a.a. |
| NCBI ID | WP_121590958.1 | Uniprot ID | - |
| Organism | Bacillus subtilis subsp. subtilis strain PJ-7 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 343123..354160
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D9C11_RS02020 (D9C11_02020) | - | 343221..343493 (-) | 273 | Protein_402 | amyloid fiber anchoring/assembly protein TapA | - |
| D9C11_RS02025 (D9C11_02025) | - | 343631..344755 (+) | 1125 | WP_014478926.1 | IS4-like element IS4Bsu1 family transposase | - |
| D9C11_RS02030 (D9C11_02030) | tapA | 344900..345391 (-) | 492 | Protein_404 | amyloid fiber anchoring/assembly protein TapA | - |
| D9C11_RS02035 (D9C11_02035) | yqzG | 345662..345988 (+) | 327 | WP_026113671.1 | YqzG/YhdC family protein | - |
| D9C11_RS02040 (D9C11_02040) | spoIITA | 346030..346209 (-) | 180 | WP_014480252.1 | YqzE family protein | - |
| D9C11_RS02045 (D9C11_02045) | comGG | 346280..346654 (-) | 375 | WP_032726157.1 | ComG operon protein ComGG | Machinery gene |
| D9C11_RS02050 (D9C11_02050) | comGF | 346655..347035 (-) | 381 | WP_121590957.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| D9C11_RS02055 (D9C11_02055) | comGE | 347061..347408 (-) | 348 | WP_017696195.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| D9C11_RS02060 (D9C11_02060) | comGD | 347392..347823 (-) | 432 | WP_017696194.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| D9C11_RS02065 (D9C11_02065) | comGC | 347813..348109 (-) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
| D9C11_RS02070 (D9C11_02070) | comGB | 348123..349160 (-) | 1038 | WP_121590958.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| D9C11_RS02075 (D9C11_02075) | comGA | 349147..350217 (-) | 1071 | WP_015714258.1 | competence protein ComGA | Machinery gene |
| D9C11_RS02085 (D9C11_02085) | corA | 350626..351578 (-) | 953 | Protein_414 | magnesium transporter CorA | - |
| D9C11_RS02090 (D9C11_02090) | yqhB | 351721..353049 (+) | 1329 | WP_121590959.1 | hemolysin family protein | - |
| D9C11_RS02095 (D9C11_02095) | rsbRD | 353102..353938 (-) | 837 | WP_043857820.1 | RsbT co-antagonist protein RsbRD | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39936.41 Da Isoelectric Point: 9.8617
>NTDB_id=319304 D9C11_RS02070 WP_121590958.1 348123..349160(-) (comGB) [Bacillus subtilis subsp. subtilis strain PJ-7]
MKKIRKTWPLKDQARLLKRLGEMTASGYTLLDGLRLMELQMNKKQSADLTDTVTRLREGAPFYQVLKRLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLILFSAGIGIYYWLVFKKKSPARQMLICVRIPLIGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLHAFKHQT
FLPFYRCEAEHVIERLKAGESIEAAICGSPFFETDFSKVISHGQLSGRLDRELYTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLLPMYQMMNQM
MKKIRKTWPLKDQARLLKRLGEMTASGYTLLDGLRLMELQMNKKQSADLTDTVTRLREGAPFYQVLKRLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLILFSAGIGIYYWLVFKKKSPARQMLICVRIPLIGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLHAFKHQT
FLPFYRCEAEHVIERLKAGESIEAAICGSPFFETDFSKVISHGQLSGRLDRELYTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLLPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=319304 D9C11_RS02070 WP_121590958.1 348123..349160(-) (comGB) [Bacillus subtilis subsp. subtilis strain PJ-7]
ATGAAAAAGATTAGAAAAACCTGGCCGTTAAAGGATCAGGCCCGGTTATTAAAGCGGCTCGGAGAAATGACGGCAAGCGG
ATATACACTTCTGGATGGATTGCGACTGATGGAACTTCAGATGAATAAGAAGCAGTCAGCTGACTTGACTGACACGGTCA
CTCGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTATTAAAGCGTTTGTCATTTCATAAGGAAGCTGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTTGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGGGTGCTGCGCTATCCGCTTTTCCTCATCTTCACCGTTGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAATTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTGATTCTTTTTTCAGCTGGTATCGGGATTTATTACTGGCTTGTGTTTAAGAA
AAAATCACCTGCCAGGCAAATGCTTATTTGTGTCAGGATTCCTTTGATTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCCATTTATGACAGCCTTCATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCAGAACACGTGATTGAACGGCTAAAAGCCGGGGAATCAATTGAAGCTGCTATTTG
TGGGAGCCCTTTTTTTGAAACTGATTTTTCAAAAGTCATATCCCACGGCCAGCTGAGCGGCCGCCTAGATCGTGAGCTTT
ACACATACAGCCAGTTCATATTGCAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCGATGATTTAT
GGATTTGTTGCTGCAATGATCTTACTTGTGTATTTATCTATGCTTTTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAAAAGATTAGAAAAACCTGGCCGTTAAAGGATCAGGCCCGGTTATTAAAGCGGCTCGGAGAAATGACGGCAAGCGG
ATATACACTTCTGGATGGATTGCGACTGATGGAACTTCAGATGAATAAGAAGCAGTCAGCTGACTTGACTGACACGGTCA
CTCGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTATTAAAGCGTTTGTCATTTCATAAGGAAGCTGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTTGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGGGTGCTGCGCTATCCGCTTTTCCTCATCTTCACCGTTGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAATTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTGATTCTTTTTTCAGCTGGTATCGGGATTTATTACTGGCTTGTGTTTAAGAA
AAAATCACCTGCCAGGCAAATGCTTATTTGTGTCAGGATTCCTTTGATTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCCATTTATGACAGCCTTCATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCAGAACACGTGATTGAACGGCTAAAAGCCGGGGAATCAATTGAAGCTGCTATTTG
TGGGAGCCCTTTTTTTGAAACTGATTTTTCAAAAGTCATATCCCACGGCCAGCTGAGCGGCCGCCTAGATCGTGAGCTTT
ACACATACAGCCAGTTCATATTGCAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCGATGATTTAT
GGATTTGTTGCTGCAATGATCTTACTTGTGTATTTATCTATGCTTTTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
94.118 |
93.623 |
0.881 |