Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   D9C10_RS23340 Genome accession   NZ_CP032853
Coordinates   4071035..4071175 (+) Length   46 a.a.
NCBI ID   WP_225910706.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain MH-1     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 4066035..4076175
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D9C10_RS23335 srfAB 4067968..4070943 (+) 2976 Protein_4254 surfactin non-ribosomal peptide synthetase SrfAB -
  D9C10_RS23340 comS 4071035..4071175 (+) 141 WP_225910706.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5260.11 Da        Isoelectric Point: 8.7633

>NTDB_id=319292 D9C10_RS23340 WP_225910706.1 4071035..4071175(+) (comS) [Bacillus subtilis subsp. subtilis strain MH-1]
MNRSGKHLISCIILYPRPSGECISSISLDKQTQATTSPLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=319292 D9C10_RS23340 WP_225910706.1 4071035..4071175(+) (comS) [Bacillus subtilis subsp. subtilis strain MH-1]
TTGAACCGATCAGGCAAGCATCTTATCAGCTGCATTATCCTGTATCCCCGGCCCAGCGGAGAATGTATATCCTCAATCAG
CTTGGACAAGCAAACACAAGCTACAACGTCCCCGCTGTACTTCTGCTGGAGGGAGAAGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(1-44)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

97.826

100

0.978

Multiple sequence alignment