Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | D9C10_RS20240 | Genome accession | NZ_CP032853 |
| Coordinates | 3726689..3726979 (-) | Length | 96 a.a. |
| NCBI ID | WP_003226760.1 | Uniprot ID | A0A7G9PCZ4 |
| Organism | Bacillus subtilis subsp. subtilis strain MH-1 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3721689..3731979
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D9C10_RS20200 (D9C10_20200) | darA | 3721712..3722041 (+) | 330 | WP_088272133.1 | cyclic di-AMP receptor DarA | - |
| D9C10_RS20205 (D9C10_20205) | yaaR | 3722054..3722494 (+) | 441 | WP_009966249.1 | YaaR family protein | - |
| D9C10_RS20210 (D9C10_20210) | holB | 3722506..3723495 (+) | 990 | WP_088272134.1 | DNA polymerase III subunit delta' | - |
| D9C10_RS20215 (D9C10_20215) | ricT | 3723498..3724325 (+) | 828 | WP_041338386.1 | competence/sporulation regulator complex protein RicT | - |
| D9C10_RS20220 (D9C10_20220) | yabA | 3724340..3724699 (+) | 360 | WP_003218308.1 | replication initiation-control protein YabA | - |
| D9C10_RS20225 (D9C10_20225) | trmNF | 3724758..3725501 (+) | 744 | WP_041338388.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| D9C10_RS20230 (D9C10_20230) | yazA | 3725488..3725787 (+) | 300 | WP_003242983.1 | GIY-YIG nuclease family protein | - |
| D9C10_RS20235 (D9C10_20235) | rsmI | 3725762..3726640 (+) | 879 | WP_003243457.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| D9C10_RS20240 (D9C10_20240) | abrB | 3726689..3726979 (-) | 291 | WP_003226760.1 | transition state genes transcriptional regulator AbrB | Regulator |
| D9C10_RS20245 (D9C10_20245) | metG | 3727474..3729468 (+) | 1995 | WP_014478594.1 | methionine--tRNA ligase | - |
| D9C10_RS20250 (D9C10_20250) | dayD | 3729548..3730315 (+) | 768 | WP_014478595.1 | TatD family hydrolase | - |
| D9C10_RS20255 (D9C10_20255) | yabE | 3730471..3731784 (+) | 1314 | WP_003226754.1 | ubiquitin-like domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10772.62 Da Isoelectric Point: 6.3482
>NTDB_id=319282 D9C10_RS20240 WP_003226760.1 3726689..3726979(-) (abrB) [Bacillus subtilis subsp. subtilis strain MH-1]
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
Nucleotide
Download Length: 291 bp
>NTDB_id=319282 D9C10_RS20240 WP_003226760.1 3726689..3726979(-) (abrB) [Bacillus subtilis subsp. subtilis strain MH-1]
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |