Detailed information NTG0319280

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: D9C10_RS20015
• Genome accession: NZ_CP032853
• Coordinates: 3685339..3686451 (+)
• Length: 370 a.a.
• NCBI ID: WP_014478578.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. subtilis strain MH-1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3680339..3691451

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D9C10_RS19990 (D9C10_19990)	rnpA	3681049..3681399 (-)	351	WP_014481515.1	ribonuclease P protein component	-
D9C10_RS19995 (D9C10_19995)	rpmH	3681551..3681685 (-)	135	WP_003178075.1	50S ribosomal protein L34	-
D9C10_RS20000 (D9C10_20000)	dnaA	3682312..3683652 (+)	1341	WP_003242674.1	chromosomal replication initiator protein DnaA	-
D9C10_RS20005 (D9C10_20005)	dnaN	3683841..3684977 (+)	1137	WP_003226811.1	DNA polymerase III subunit beta	-
D9C10_RS20010 (D9C10_20010)	rlbA	3685108..3685323 (+)	216	WP_003226810.1	ribosome maturation protein RlbA	-
D9C10_RS20015 (D9C10_20015)	recF	3685339..3686451 (+)	1113	WP_014478578.1	DNA replication/repair protein RecF	Machinery gene
D9C10_RS20020 (D9C10_20020)	remB	3686469..3686714 (+)	246	WP_003219266.1	extracellular matrix regulator RemB	-
D9C10_RS20025 (D9C10_20025)	gyrB	3686769..3688685 (+)	1917	WP_003226808.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	-
D9C10_RS20030 (D9C10_20030)	gyrA	3688896..3691361 (+)	2466	WP_014475555.1	DNA topoisomerase (ATP-hydrolyzing) subunit A	-

Sequence

Protein

• Length: 370 a.a.
• Molecular weight: 42304.34 Da
• Isoelectric Point: 7.3660

>NTDB_id=319280 D9C10_RS20015 WP_014478578.1 3685339..3686451(+) (recF) [Bacillus subtilis subsp. subtilis strain MH-1]
MYIQNLELSSYRNYDHAELQFENKVNVIIGENAQGKTNLMEAIYVLSMAKSHRTSNDKELIRWDKDYAKIEGRVMKQNGA
IPMQLVISKKGKKGKVNHIEQQKLSQYVGALNTIMFAPEDLNLVKGSPQVRRRFLDMEIGQVSPVYLHDLSLYQKILSQR
NHFLKQLQTRKQTDRTMLDVLTDQLIEVAAKVVVKRLQFTAQLEKWAQPIHAGISRGLEELTLKYHTALDVSDPLDLSKI
GDSYQEAFSKLREKEIERGVTLSGPHRDDVLFYVNGRDVQTYGSQGQQRTTALSLKLAEIDLIHEEIGEYPILLLDDVLS
ELDDYRQSHLLHTIQGRVQTFVTTTSVDGIDHETLRQAGMFRVQNGALVK

Nucleotide

• Length: 1113 bp

>NTDB_id=319280 D9C10_RS20015 WP_014478578.1 3685339..3686451(+) (recF) [Bacillus subtilis subsp. subtilis strain MH-1]
TTGTATATCCAGAACTTAGAACTTTCATCTTACCGCAACTACGACCATGCTGAACTTCAATTTGAAAATAAAGTAAATGT
GATCATCGGAGAAAACGCCCAGGGGAAGACAAACCTCATGGAGGCGATCTATGTCTTGTCCATGGCGAAATCGCACCGGA
CATCAAATGACAAAGAACTTATACGGTGGGACAAAGACTATGCTAAAATAGAGGGAAGAGTGATGAAGCAAAACGGGGCG
ATCCCGATGCAGCTCGTCATCTCCAAAAAGGGTAAAAAGGGCAAGGTCAATCATATTGAACAGCAAAAGCTCAGCCAGTA
TGTCGGGGCCCTCAACACCATTATGTTCGCGCCGGAAGATTTAAATCTTGTAAAGGGAAGCCCTCAAGTGAGAAGGCGGT
TTCTTGACATGGAAATTGGACAGGTTTCTCCCGTCTATCTTCATGATCTTTCTCTTTACCAGAAAATCCTTTCCCAGCGG
AATCATTTTTTGAAACAGCTGCAAACAAGAAAACAAACTGACCGGACGATGCTCGATGTTCTGACCGATCAGCTTATAGA
AGTTGCAGCAAAAGTCGTCGTAAAACGCCTGCAGTTTACAGCACAGCTCGAGAAATGGGCGCAGCCCATCCATGCAGGCA
TCTCAAGAGGGCTTGAAGAACTTACCCTGAAATACCATACAGCTCTTGATGTATCAGATCCCCTAGATTTGTCGAAAATA
GGAGATAGCTATCAAGAAGCGTTTTCTAAATTAAGAGAAAAAGAAATTGAGCGTGGTGTGACGCTGTCAGGGCCTCATCG
CGATGATGTTCTTTTCTATGTGAACGGACGCGATGTGCAGACGTATGGTTCTCAAGGACAGCAGCGAACGACGGCGTTGT
CCCTTAAGCTGGCGGAGATTGACCTGATCCATGAAGAAATCGGAGAATATCCCATTTTACTATTGGATGATGTACTGAGT
GAACTGGATGATTATCGCCAGTCACACTTGCTTCATACGATCCAAGGCCGTGTACAAACGTTTGTCACAACGACAAGCGT
TGATGGCATTGATCACGAAACCTTACGTCAAGCAGGAATGTTCCGTGTGCAAAATGGTGCGTTAGTGAAGTGA

Domains

Predicted by InterproScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (2-350)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Bacillus subtilis subsp. subtilis str. 168	99.459	100	0.995