Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   D9C10_RS02565 Genome accession   NZ_CP032853
Coordinates   476320..477114 (+) Length   264 a.a.
NCBI ID   WP_014479217.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain MH-1     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 471320..482114
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D9C10_RS02535 (D9C10_02535) sxzA 472159..473190 (+) 1032 WP_003233568.1 iron ABC transporter permease -
  D9C10_RS02540 (D9C10_02540) yfhB 473305..474186 (+) 882 WP_014479213.1 PhzF family phenazine biosynthesis isomerase -
  D9C10_RS02545 (D9C10_02545) yfhC 474274..474858 (+) 585 WP_032723010.1 nitroreductase -
  D9C10_RS02550 (D9C10_02550) yfhD 474897..475088 (-) 192 WP_003233561.1 YfhD family protein -
  D9C10_RS02555 (D9C10_02555) yfhE 475155..475265 (-) 111 WP_003223230.1 YfhE family protein -
  D9C10_RS02560 (D9C10_02560) yfhF 475320..476231 (-) 912 WP_014479216.1 TIGR01777 family oxidoreductase -
  D9C10_RS02565 (D9C10_02565) recX 476320..477114 (+) 795 WP_014479217.1 recombination regulator RecX Regulator
  D9C10_RS02570 (D9C10_02570) yfhH 477116..477430 (+) 315 WP_003244592.1 YfhH family protein -
  D9C10_RS02575 (D9C10_02575) yfhI 477573..478766 (+) 1194 WP_003243500.1 MFS transporter -
  D9C10_RS02580 (D9C10_02580) sspK 478798..478950 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  D9C10_RS02585 (D9C10_02585) yfhJ 479075..479344 (+) 270 WP_003243789.1 YfhJ family protein -
  D9C10_RS02590 (D9C10_02590) yfhK 479489..480007 (+) 519 WP_014479218.1 SH3 domain-containing protein -
  D9C10_RS02595 (D9C10_02595) spdL 480092..480424 (+) 333 WP_014479219.1 SdpC immunity protein SpdL -
  D9C10_RS02600 (D9C10_02600) ephM 480411..481271 (+) 861 WP_014479220.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31029.21 Da        Isoelectric Point: 6.6686

>NTDB_id=319216 D9C10_RS02565 WP_014479217.1 476320..477114(+) (recX) [Bacillus subtilis subsp. subtilis strain MH-1]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAIK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=319216 D9C10_RS02565 WP_014479217.1 476320..477114(+) (recX) [Bacillus subtilis subsp. subtilis strain MH-1]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGTGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACGG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATTAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.242

100

0.992

Multiple sequence alignment