Detailed information    

insolico Bioinformatically predicted

Overview


Name   comS   Type   Regulator
Locus tag   D9C09_RS22835 Genome accession   NZ_CP032852
Coordinates   1038841..1038981 (-) Length   46 a.a.
NCBI ID   WP_225910706.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain GFR-12     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 1033841..1043981
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D9C09_RS22830 - 1037723..1038895 (-) 1173 Protein_1006 condensation domain-containing protein -
  D9C09_RS22835 comS 1038841..1038981 (-) 141 WP_225910706.1 competence protein ComS Regulator
  D9C09_RS22840 srfAB 1039073..1042117 (-) 3045 Protein_1008 surfactin non-ribosomal peptide synthetase SrfAB -

Sequence


Protein


Download         Length: 46 a.a.        Molecular weight: 5260.11 Da        Isoelectric Point: 8.7633

>NTDB_id=319215 D9C09_RS22835 WP_225910706.1 1038841..1038981(-) (comS) [Bacillus subtilis subsp. subtilis strain GFR-12]
MNRSGKHLISCIILYPRPSGECISSISLDKQTQATTSPLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=319215 D9C09_RS22835 WP_225910706.1 1038841..1038981(-) (comS) [Bacillus subtilis subsp. subtilis strain GFR-12]
TTGAACCGATCAGGCAAGCATCTTATCAGCTGCATTATCCTGTATCCCCGGCCCAGCGGAGAATGTATATCCTCAATCAG
CTTGGACAAGCAAACACAAGCTACAACGTCCCCGCTGTACTTCTGCTGGAGGGAGAAGTAG

Domains


Predicted by InterproScan.

(1-44)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

97.826

100

0.978


Multiple sequence alignment