Detailed information NTG0319179

Bioinformatically predicted

Overview

• Name: abrB
• Type: Regulator
• Locus tag: D9C09_RS11990
• Genome accession: NZ_CP032852
• Coordinates: 2285542..2285820 (+)
• Length: 92 a.a.
• NCBI ID: WP_003244728.1
• Uniprot ID: A0A199WGU6
• Organism: Bacillus subtilis subsp. subtilis strain GFR-12
• Function: repression of comK; repression of rok (predicted from homology) Competence regulation

Genomic Context

Location: 2280542..2290820

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D9C09_RS11970 (D9C09_11970)	-	2281192..2282544 (-)	1353	WP_014478984.1	IS1182 family transposase	-
D9C09_RS11975 (D9C09_11975)	ampS	2282674..2283906 (-)	1233	WP_003232341.1	aminopeptidase	-
D9C09_RS11980 (D9C09_11980)	ykpC	2284016..2284150 (-)	135	WP_003238865.1	protein YkpC	-
D9C09_RS11985 (D9C09_11985)	mreBH	2284251..2285258 (-)	1008	WP_026113694.1	cell shape-determining protein MreBH	-
D9C09_RS11990 (D9C09_11990)	abrB	2285542..2285820 (+)	279	WP_003244728.1	transcriptional regulator AbhA	Regulator
D9C09_RS11995 (D9C09_11995)	kinC	2286010..2287296 (+)	1287	WP_003232333.1	two-component sensor histidine kinase KinC	-
D9C09_RS12000 (D9C09_12000)	ykqA	2287312..2288145 (+)	834	WP_014479687.1	gamma-glutamylcyclotransferase	-
D9C09_RS12005 (D9C09_12005)	ktrC	2288208..2288873 (+)	666	WP_003222311.1	Ktr system potassium transporter KtrC	-
D9C09_RS12010 (D9C09_12010)	ade	2289028..2290761 (+)	1734	WP_069837481.1	adenine deaminase	-

Sequence

Protein

• Length: 92 a.a.
• Molecular weight: 10256.07 Da
• Isoelectric Point: 5.8808

>NTDB_id=319179 D9C09_RS11990 WP_003244728.1 2285542..2285820(+) (abrB) [Bacillus subtilis subsp. subtilis strain GFR-12]
MKSIGVVRKVDELGRIVMPIELRRALDIAIKDSIEFFVDGDKIILKKYKPHGVCLMTGEITSENKEYGNGKITLSPEGAQ
LLLEEIQAALKE

Nucleotide

• Length: 279 bp

>NTDB_id=319179 D9C09_RS11990 WP_003244728.1 2285542..2285820(+) (abrB) [Bacillus subtilis subsp. subtilis strain GFR-12]
ATGAAATCAATAGGTGTTGTGAGAAAAGTAGATGAATTAGGCCGCATTGTCATGCCGATTGAGTTGAGACGGGCATTGGA
TATTGCCATAAAAGACAGCATTGAGTTTTTTGTTGACGGAGATAAAATTATCTTGAAAAAGTACAAACCTCATGGCGTTT
GTTTAATGACTGGAGAAATCACTTCAGAAAATAAAGAATACGGCAACGGTAAAATTACGCTAAGCCCTGAGGGTGCACAG
CTGCTTCTCGAAGAAATTCAAGCCGCTTTAAAAGAATAA

Domains

Predicted by InterproScan.

• AbrB C-terminal domain (AbrB_C) (53-88)

• Antidote-toxin recognition MazE, bacterial antitoxin (MazE_antitoxin) (8-51)

3D structure

• AlphaFold DB: A0A199WGU6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
abrB	Bacillus subtilis subsp. subtilis str. 168	58.242	98.913	0.576